| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Paes_2212 |
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| Symbol | |
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| ID | 6459713 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prosthecochloris aestuarii DSM 271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011059 |
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| Strand | + |
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| Start bp | 2390853 |
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| End bp | 2393249 |
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| Gene Length | 2397 bp |
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| Protein Length | 798 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 642726188 |
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| Product | DNA topoisomerase I |
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| Protein accession | YP_002016861 |
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| Protein GI | 194335001 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0550] Topoisomerase IA
[COG0551] Zn-finger domain associated with topoisomerase type I |
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| TIGRFAM ID | [TIGR01051] DNA topoisomerase I, bacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTTCAT CCTCAGCGGC TCCGTCTGCA AAGAACAAAA CGCTTATTGT TGTCGAATCT
CCATCAAAAG CGAAAACAAT CAATAAATAT CTCGGTACGG GCTATAAGGT CTTTGCCTCG
GTCGGTCACA TCAAGGACCT TCCGAAAAAA GAGATCGGCC TGGACTTCGA CAACAACTAC
GAACCCCGCT ATGAAGTCAT CGCAGGGAAA GAAAAGGTTG TCCGTCAGCT TCGCAAGCTG
GCCGGGGAAG CAAACGACAT CATGATAGCC ACTGACCCTG ATCGTGAAGG CGAAGCGATA
GCGTGGCACA TTGCCAATGA AGTCGAAGGC GCCCGAAAAC CGGTGCAGCG GGTCCTGTTC
AATGAGATTA CGAAAAACGC CATTATCGAT GCGATAAGCC ATCCCCGCCA GATCGACTAC
CGCCTCGTTC GTTCCCAGCA GACCCGTCAG GGACTCGACA AGATCGTCGG CTACAAAATC
AGCCCGTTTC TGTGGAACGT TGTCTTCCGC GGGCTGTCGG CGGGAAGAGT TCAATCCGTC
GCCCTCAGGC TGATCTGCGA ACGCGAAGAT GAAATCGGAA AGTTCGAAAC CAGAGAATAC
TGGACACTGT TTGCCGATTT CACGACCGTA TCAGGGGAAA CATTCTCTGC CAAACTGGTC
AAAATCAACG GCAAAGATGT CGATATCACC AACGAGAACG ATGCGACCGC CGTTGCCGAC
ACCATTCTCT CGCGCATCTA CGGCGTGACG GATATCTCCT CAAGAATCCA GCAGCGTAAA
CCGCCCGTTG CATTTACCAC CTCACTGCTG CAGCAGGCGG CATCGAACCA GCTCGGATTC
GGTTCAAAGA AAACCATGCG TGCGGCACAG CAGCTTTATG AAGGTATCGA ACTCGGCCCC
GAAGGCGCTA CCGGTCTGAT CACCTACATG AGAACCGATT CGACAAGGGT CAGCGCTGAA
GCTGTCGGTC AGGCACAAAG TTATATCGAA CAGCAGTTCG GCCCGCAATA CGCCGGGCAG
GGCAGAGCGG GAAAAAACGA CAAAAAAACC CAGGATGCAC ACGAAGCTAT CCGCCCGACA
TCGATATTCC GCACTCCGGC GGCAATGAAA CCGTTTCTGA CGGCAGACCA GTTCAAACTC
TACGAACTGA TCTGGAAACG CTTTCTCGCA TCCAGAATGG CTCCTGCAAA AATCGAACTG
ACCAAGGTAG AGGTCTCTGA TCATGAAGGA GAATTTCTCT TTCGCGCCAA TGGCAGCAAG
GTGCTCTTTC CCGGCTTTCT CCAGGTCTAC AGCGATCAGA AGGAGCTCGA TTACGAAGCA
AAAACATCGA CCAAGGATGA CGAGGAAAAA GAGCAAACCG TTCAGCTTCC AAAAAAACTT
GATCTGAACG AAAAACTCGA CTTGCAAACA CTTGATAAAA AACAGAGCTT CACCCGACCG
CCCGCCCGCT ACACCGAAGC AAGCCTTGTC AAAGAGCTCG ACAACCACGG CATTGGACGA
CCCTCGACCT ATGCGGCAAT TTTCTCGACC CTTCAGGACC GGCGATATGT TGAATTGCTG
AAACGAAAAA TCATTCCTAC CGAACTCGGT CGGGATGTAT CATTGATCCT GGTTGCCAAT
TTCCCTGATC TGTTTAACGT GACCTTTACT GCGCAGATGG AGGATGAACT CGATAAAGTC
GCTGCCGGCC AGGACGACTA TGAAAAAGTG CTCGACAGCT TCTATAAACC GCTCGAAGCC
TCTCTCTCAG ACCGTAAAAA AGATCCGGTT CTTCCGCAGA ACGACAAAGC GGAACGGTGC
GACAAGTGCG GAACAGGAAA AATGGTGGTC AAATGGACCA GTAGCGGCAA GTTTCTCGGA
TGTTCTGAAT ATCCGAAATG CAAAAACATA AAACCGCTCA GCAATTCGAA ACCAAAACCA
AAAGGCACCG GCATCGCCTG TCCCGGATGC GAAGACGGAC ACATGGTGCT GCGCGACGGG
CGCTTCGGCC CGTTTCTTGC GTGCTCCAAC TACCCTAAAT GCAACACGCT GTTGAACCTC
GACAAGCAGC GACGCATCCA GCCGCCGAAA ACACCTCCAC TCGAAACCGA TCTTTCCTGT
CCGAAATGCG GTGCCCCCCT CTATTTACGA ACAGGAAAAC GCGGACTGTG GCTGGGGTGT
TCGAAATTCC CTAAATGCAG GGGTCGTCAG GCCTGGGGAC AGCTTGAGCC CGCCCTGCAG
CAACACTGGC AAAGTGTCAT GGATCAGCAT CTTGCCGCTC ATCCACAGGT GACGCTTCTG
ATGACCGACG GTTCACCTGT GAACATGCAG CTCACGGTCG ACGAGATCAT GGTATTTGCC
GAAGAAAAAG GTCTCATCCC CTTGATGGAG GAGCAGAAAA CCGGGGTCAG TTCATAA
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| Protein sequence | MASSSAAPSA KNKTLIVVES PSKAKTINKY LGTGYKVFAS VGHIKDLPKK EIGLDFDNNY
EPRYEVIAGK EKVVRQLRKL AGEANDIMIA TDPDREGEAI AWHIANEVEG ARKPVQRVLF
NEITKNAIID AISHPRQIDY RLVRSQQTRQ GLDKIVGYKI SPFLWNVVFR GLSAGRVQSV
ALRLICERED EIGKFETREY WTLFADFTTV SGETFSAKLV KINGKDVDIT NENDATAVAD
TILSRIYGVT DISSRIQQRK PPVAFTTSLL QQAASNQLGF GSKKTMRAAQ QLYEGIELGP
EGATGLITYM RTDSTRVSAE AVGQAQSYIE QQFGPQYAGQ GRAGKNDKKT QDAHEAIRPT
SIFRTPAAMK PFLTADQFKL YELIWKRFLA SRMAPAKIEL TKVEVSDHEG EFLFRANGSK
VLFPGFLQVY SDQKELDYEA KTSTKDDEEK EQTVQLPKKL DLNEKLDLQT LDKKQSFTRP
PARYTEASLV KELDNHGIGR PSTYAAIFST LQDRRYVELL KRKIIPTELG RDVSLILVAN
FPDLFNVTFT AQMEDELDKV AAGQDDYEKV LDSFYKPLEA SLSDRKKDPV LPQNDKAERC
DKCGTGKMVV KWTSSGKFLG CSEYPKCKNI KPLSNSKPKP KGTGIACPGC EDGHMVLRDG
RFGPFLACSN YPKCNTLLNL DKQRRIQPPK TPPLETDLSC PKCGAPLYLR TGKRGLWLGC
SKFPKCRGRQ AWGQLEPALQ QHWQSVMDQH LAAHPQVTLL MTDGSPVNMQ LTVDEIMVFA
EEKGLIPLME EQKTGVSS
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