| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Paes_2204 |
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| Symbol | |
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| ID | 6459727 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prosthecochloris aestuarii DSM 271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011059 |
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| Strand | - |
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| Start bp | 2377035 |
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| End bp | 2378213 |
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| Gene Length | 1179 bp |
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| Protein Length | 392 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 642726180 |
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| Product | secretion protein HlyD family protein |
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| Protein accession | YP_002016853 |
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| Protein GI | 194334993 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | [TIGR01843] type I secretion membrane fusion protein, HlyD family |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTACAG AGCCTTCAGA TTTCTTACCG GAAAACAGTA GCGACAAGAA GCAGAGCACA
TCCTCCGCGA CGTTCTGGAA AACATCAGGC TCGATGCGCA TCGGCATTAT GGTGCTGCTC
GCAGGTTTCG GCGCTTTTCT TCTCTGGGCG GCGCTGGCTC CGCTTGATGA AGGCGTGCCG
TGTACCGGAG CGGTCAGTAT CTCCACCCGA AGCAAGGTGG TCCAGCATCT GAAGGGGGGA
ATTGTCCATT CGGTCAACGT GCGCGAAGGG CAGATGGTTG GAAAAGATGA TCTTCTTATG
ACACTGTCCG ATCAGGAGAC CCTTGCCCGC TACAGGGAGG TTTATCAGCA CTATCTCGGC
TTGCGGGCGG CCGAAAGCAG ACTTCTGGCT GAAGAGCGGG GAGCATCATC AATCACCTTT
CATCCCGATC TGCTGCGTTC GCCCGATACC GCGCTGGCCG CTGAGATGAT GGCAACGCAG
CGGGAGCTTT TTACTGCCCG ACAGCAAGCC ATGCGTTCGG TGTGTGAGCG GCTGAAAGGG
GTGCGTGCTA TGGTTTCTGA AGGCTATGCA CCGCGATACC AGCAACTGGA GCTTGAGGGG
CACCTTGCGG AGCTGCAGTC TCAGCGGGCA TCCGAGATGG CCGCTGTGCA GGTTGCTGTC
GATGCCTGGC AGGAAAAAAC CGCCGCCCTG CATGATGAAC TGGAGCGAAC CGGTATCCGC
TCTCCTGCTT CCGGACAGGT CGTTGGTCTG CAGGTACAGA CGGTCGGAGC GGTGATCTCT
CCCGGTGAAA AGATCATGGA TATCGTTCCG CTTGATGAAA AGCTGCTGGT TGAGGTCCGA
GTAGCGCCTC ACCTGATTGA CAGGGTGCAC TCTGGTCTTC CGGCGGATAT GCGTTTTGCT
TCGTTTGCGC ACTCTCCTAT GCTCATGGTT GGTGGTGTGG TCGAGTCGGT CTCCCATGAC
CTGATTACTG ACCCGAAGAT GAATCCTGTG ATGCCGGGGG CGACCTACTA TCTCGCCCGG
GTAGCGTTGA CTCCCGAAGG CATTGCGTCA CTCGGCAGCA GGAAACTGCA GGCAGGCATG
CCGGTGCAGA CGGTGATCCG TACCGGTGAA CGCACGCTGC TGACCTATCT GCTGCATCCG
CTGGTCAAAC GGATAACCGC ATCTTTGAAG GAGGAGTAG
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| Protein sequence | MSTEPSDFLP ENSSDKKQST SSATFWKTSG SMRIGIMVLL AGFGAFLLWA ALAPLDEGVP
CTGAVSISTR SKVVQHLKGG IVHSVNVREG QMVGKDDLLM TLSDQETLAR YREVYQHYLG
LRAAESRLLA EERGASSITF HPDLLRSPDT ALAAEMMATQ RELFTARQQA MRSVCERLKG
VRAMVSEGYA PRYQQLELEG HLAELQSQRA SEMAAVQVAV DAWQEKTAAL HDELERTGIR
SPASGQVVGL QVQTVGAVIS PGEKIMDIVP LDEKLLVEVR VAPHLIDRVH SGLPADMRFA
SFAHSPMLMV GGVVESVSHD LITDPKMNPV MPGATYYLAR VALTPEGIAS LGSRKLQAGM
PVQTVIRTGE RTLLTYLLHP LVKRITASLK EE
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