Gene Paes_2193 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPaes_2193 
Symbol 
ID6459749 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProsthecochloris aestuarii DSM 271 
KingdomBacteria 
Replicon accessionNC_011059 
Strand
Start bp2365182 
End bp2367332 
Gene Length2151 bp 
Protein Length716 aa 
Translation table11 
GC content47% 
IMG OID642726169 
Productintegral membrane sensor hybrid histidine kinase 
Protein accessionYP_002016842 
Protein GI194334982 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.14825 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTGCTA TCATGAAGAT CATCGAAAGA ATGCAAGCCT CATTTCAGGA AGGCACCCAG 
ATATCGCAAT TCAATATGAT TGCTGCAGCA ATTATCGGCG GCACGGGCCA TTTCCTGCTC
TACTTCGTCT ACAAATACCT CTTCCAGCAC AACTGGGAAA ACCTCCCTTT CCGGCTTGTT
GCGGTAGTGC TCTCCATAGG AGTCTTGTTA AGGCTGCGCT ATCCGGACTT TCTGGGAAAA
TATTTTCTCT ATTTCTGGCA TTTCATGCTC ATCTACATGC TGCCGTTTAT CATCACCCTG
TTCGCATTAA AGAACAATTT TGAACAGCCC TGGCTCTACT GGGAAATTTT CATGATTTTC
GTGCTCATGT CGTTCGTACC GAACATGTTT ATGTTCCTCT TCGATCTGCT TTCGGGTCTT
GCTGCTGCCT ACGCGGTTTT TCTCATAAGC TCGCCGAACA CTGAAATCAT CTCAACATTT
TCCGTCGCCG AATATTCTAT TGTTGCCGTC TTTTCAATCG TTGCCGGCTA CGTCTTCAGC
TTAAGCAACA TCAGAGGCAT TGTCGCTCAG GAGAAAAACA CTGCATTGCA AATGCTGGCG
GCAAGTATCG CCCATGAAAT GAGAAATCCT TTGGGACAGG TCAAATTCAG TTTCGAAAAA
ATTCTCCAGG AACTGCCGAT CGAGCATCAG GAAAAAATGG TTGAGCAGAT TTCGGCAGAT
GCGCTTGACC GGGTTTACCT GAGTGTTGCC CAGGGACAGA TGGCAGTTAA CCGCGGGGGC
CAGATTATCA ACATGCTTCT CAATGAAACA AAAAACAAAT CTATCGATCA GGACAACTTC
ACCTACTGCT CCTGCCAGAG TATCACCCGA AAAGCCCTTG ATGAATATGG CTATGAATCT
GATGAAGAAC GCAGAAAACT GACGCTTGAT GTCCAGGAGG ACTTTTTCAT ACGGGTCGAT
GAAACACTCT ACATCTTTGT GCTCTTTAAT CTGATTATCA ATGCATTCTA TTTTATAAAG
CCCTACCCTG ATGCGCGAAT CACCATCCGT ATCGAAAAGG GAGCATCGAG AAACAGAGTC
TACGTACGAG ATACCGGTCC GGGCATTCCT TCTGAAAATC TCGACAAACT GTTTGATGCC
TTTTTCACCT CCGGAAAAAA AGGCGGAACA GGGCTTGGTC TGGCTTACTG CAAAAGAGTC
ATGCACGCTT TTCAGGGCGA TATCGTCTGC GACTCTGTCG AGGGAGAGTA TACCGAGTTT
ATGCTGACCT TTCAGAAGGA GGAAGCCGAC AAGCTGAATG ATTTCCGAAA CGCCATGATC
AGCGAATATA AAGCACTGTT CAATAACAAG CGGCTACTGA TCGTCGATGA TGAAATGGTT
GACCGCCAGA AAATCGTCGA GCAACTCAAG CCGTTCAACG TCAGCATAAG CGAAGCAGAA
AACGGGCAAC AGGCCATCGA TCAGCTTCAA AAGAAACGCT ATGATGTTGT TCTGATGAAC
CTGAACATGC CGGTCATGAA CGGTTACGAG GCAACGGAAT CCATACGGAG CGGCAAGGCA
GGTCAATCGC TGAGCAACAT TCCAATTATC GGGTTCACAT CCTCCCCGCC CTACATTGCC
AGAGCAAAAT CGGAAAAAGT CGGCATGCAG GGATTTATAG CCAAGCCTGT CGAGGAGTTC
GAACTCATCA CCAACATTGC AACCGCCCTC AAAGCGGCAT CAATCAATGG GAAAGCAACC
TTTGCCGGCC TGACAATACT GCTTGTTGAT GATGCTACCG TCATACGGCT TTCACTGAAA
GGCATGCTTG AAAAATTACA GATCAACATT GTCGAAGCCG TCAATGGAAC CAGAGCTATT
GAACACCTGA AAAACAACGG TCACCCCTGT GACCTCATCC TGATGGATTT TCAAATGCCT
GGACTTGATG GTCTGGAAAC GACCAGAATC ATCCGCAATG AGCTGGGTAG CCATCATAAA
AACATCCCCA TTATAGGGCT CAGTGGCGAA TCTGATGAAC GTGAAATCGC AAAAGCACTG
CATGCCGGCA TGAATGACTA TCTCTACAAG CCGGTTGACA ATTACCTGCT GATCAACAAA
ATCGGCAGGT GGGTCAACAC GAAACAAACG CTACAAAGCG AATGTCTTTA G
 
Protein sequence
MRAIMKIIER MQASFQEGTQ ISQFNMIAAA IIGGTGHFLL YFVYKYLFQH NWENLPFRLV 
AVVLSIGVLL RLRYPDFLGK YFLYFWHFML IYMLPFIITL FALKNNFEQP WLYWEIFMIF
VLMSFVPNMF MFLFDLLSGL AAAYAVFLIS SPNTEIISTF SVAEYSIVAV FSIVAGYVFS
LSNIRGIVAQ EKNTALQMLA ASIAHEMRNP LGQVKFSFEK ILQELPIEHQ EKMVEQISAD
ALDRVYLSVA QGQMAVNRGG QIINMLLNET KNKSIDQDNF TYCSCQSITR KALDEYGYES
DEERRKLTLD VQEDFFIRVD ETLYIFVLFN LIINAFYFIK PYPDARITIR IEKGASRNRV
YVRDTGPGIP SENLDKLFDA FFTSGKKGGT GLGLAYCKRV MHAFQGDIVC DSVEGEYTEF
MLTFQKEEAD KLNDFRNAMI SEYKALFNNK RLLIVDDEMV DRQKIVEQLK PFNVSISEAE
NGQQAIDQLQ KKRYDVVLMN LNMPVMNGYE ATESIRSGKA GQSLSNIPII GFTSSPPYIA
RAKSEKVGMQ GFIAKPVEEF ELITNIATAL KAASINGKAT FAGLTILLVD DATVIRLSLK
GMLEKLQINI VEAVNGTRAI EHLKNNGHPC DLILMDFQMP GLDGLETTRI IRNELGSHHK
NIPIIGLSGE SDEREIAKAL HAGMNDYLYK PVDNYLLINK IGRWVNTKQT LQSECL