Gene Paes_2187 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPaes_2187 
Symbol 
ID6459769 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProsthecochloris aestuarii DSM 271 
KingdomBacteria 
Replicon accessionNC_011059 
Strand
Start bp2360072 
End bp2360878 
Gene Length807 bp 
Protein Length268 aa 
Translation table11 
GC content55% 
IMG OID642726163 
Productbiotin biosynthesis protein BioC 
Protein accessionYP_002016836 
Protein GI194334976 
COG category[R] General function prediction only 
COG ID[COG4106] Trans-aconitate methyltransferase 
TIGRFAM ID[TIGR02072] biotin biosynthesis protein BioC 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGCAGT TGAACAAGAC ATTGATCCGG CAGCGTTTCG GGCGTCAGCT GCATGGTTAT 
AACCGACACG CATTTATCCA GAAGAAGATG GCCGGGCATC TGGCCGATAT GGTGAGCGCA
TCGCTTGCAT CGTCTGAGGT CGGTCGTTTG TTTGAAATAG GCGTCGGCTC TGCTGCATTG
ACAGACGCGC TGCTCCATCG TTTGCGTATC GACCGTTACT ATGCCAATGA TCTGGTTCCG
CAATGCCGAC AGATGGTGGA AACAGTTACT GCGCTTCATG GCGTAGATTC TGCCGAGTTT
CTTGATGGCG ATATAGAGGC GCTTCGGGAG ATTCCCGGAG ATCTTGATGT CATTGTTTCC
GGGGCGACCG TTCAGTGGCT TGAAGACCTG CCAGGGTTTT TCCATCGTAT GGCAGGCGCG
CTCAAGCCCG GGGGAGTGCT TGCTTTCAGC ACTTTCGGAC ATGATAATAT GCAGGAGATT
CGCGCGCTTG AATCTGTTGG CTTGCACTAC CATACCCTGG CAGAGATGCA GGCAATGGCA
GGAGAGCTCT ATGAGGTTAC CGGTATGGAG GAGGAGCGCC ATCAGCTTGA TTTCACTGGT
CCGGAAGCAG TACTTCGCCA TATCAGTCGG ACTGGCGTCA ATGGTCTTGA TGGCCGCGCA
TGGACGAAGA GCCGCCACAG GGCTTTTATC GATCGCTACC GGCGTGCGTT TTCGTCGGGC
GATGGCGTGC GCCTGACCTA TCATACGATG TATTGCTGTT TCAGGAAATG CCCTGCTTCG
GCTGGCGTTG AAGCGACGTG CTGCTGA
 
Protein sequence
MQQLNKTLIR QRFGRQLHGY NRHAFIQKKM AGHLADMVSA SLASSEVGRL FEIGVGSAAL 
TDALLHRLRI DRYYANDLVP QCRQMVETVT ALHGVDSAEF LDGDIEALRE IPGDLDVIVS
GATVQWLEDL PGFFHRMAGA LKPGGVLAFS TFGHDNMQEI RALESVGLHY HTLAEMQAMA
GELYEVTGME EERHQLDFTG PEAVLRHISR TGVNGLDGRA WTKSRHRAFI DRYRRAFSSG
DGVRLTYHTM YCCFRKCPAS AGVEATCC