Gene Paes_2175 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPaes_2175 
Symbol 
ID6460334 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProsthecochloris aestuarii DSM 271 
KingdomBacteria 
Replicon accessionNC_011059 
Strand
Start bp2348482 
End bp2349189 
Gene Length708 bp 
Protein Length235 aa 
Translation table11 
GC content51% 
IMG OID642726151 
Productmembrane protein 
Protein accessionYP_002016824 
Protein GI194334964 
COG category[S] Function unknown 
COG ID[COG0344] Predicted membrane protein 
TIGRFAM ID[TIGR00023] acyl-phosphate glycerol 3-phosphate acyltransferase 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGACAC TGATTGTTAT TCTGGCAGTG AGTTATCTCA TTGGTTCTAT TCCGACCAGC 
ATTATTGCTG GCAAACTGCT CAGGGGGATC GACGTTCGTG ATTACGGCAG CGGCAACGCC
GGAGGGACAA ACGCGTTTCG TGTCCTTGGC TGGAAAGCCG GTCTTGCCGT GACCCTGCTC
GATATCGTCA AGGGGGCCGT GGCAGCTATC TCTGTCGTTG TGTTTTTCGA GGCGCATCCG
CTGGGCGCCA TGCCCGATAT CAATCCTGTC GCTTTGCGTC TTATTGCAGG TTTGGCGGCA
GTTTTCGGTC ACGTCTTTAC GGTTTTTGCA GGTTTTCGAG GCGGAAAGGG TGTGAGTACG
GCTGCCGGGA TGATGTTCGG TATCGCGCCG GTCAGTACGC TCATCGTGCT GGCTGTTTTT
CTGCTGACGA TTTTTGTTTC CCGTTATGTT TCCGTTGCAT CGATTATTGC AGCGATCGCT
TTCCCTCTGG TTATTCTTGT CCGCAAGTAT CTGTTCGATC TCGGCGAAGG GCTTGACTAC
TATATCAGGA TGTTCAACGG TCATGTTTTT ATTCACGACA GTCTTGATTT TCATCTGCTG
ATTTTCGGGA TGATTGTCGC TTTTGCCATT ATTTATACAC ACCGCGCCAA TATCGGCCGG
CTGCTTTCCG GAAATGAAAA CAGGGTGACA TTCGGCAGAC ACGCATAG
 
Protein sequence
MLTLIVILAV SYLIGSIPTS IIAGKLLRGI DVRDYGSGNA GGTNAFRVLG WKAGLAVTLL 
DIVKGAVAAI SVVVFFEAHP LGAMPDINPV ALRLIAGLAA VFGHVFTVFA GFRGGKGVST
AAGMMFGIAP VSTLIVLAVF LLTIFVSRYV SVASIIAAIA FPLVILVRKY LFDLGEGLDY
YIRMFNGHVF IHDSLDFHLL IFGMIVAFAI IYTHRANIGR LLSGNENRVT FGRHA