Gene Paes_2169 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPaes_2169 
Symbol 
ID6460714 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProsthecochloris aestuarii DSM 271 
KingdomBacteria 
Replicon accessionNC_011059 
Strand
Start bp2343136 
End bp2343966 
Gene Length831 bp 
Protein Length276 aa 
Translation table11 
GC content55% 
IMG OID642726145 
Product2-dehydro-3-deoxyphosphooctonate aldolase 
Protein accessionYP_002016818 
Protein GI194334958 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2877] 3-deoxy-D-manno-octulosonic acid (KDO) 8-phosphate synthase 
TIGRFAM ID[TIGR01362] 3-deoxy-8-phosphooctulonate synthase 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGAAAAAT TGCTAAAGTT CTCTATTGGC CCGCTGTCGG TTCCTGATGA CAAATCATTG 
TTTTTCATTG CCGGGCCATG TCTTATCGAA AGTCGTGAGA TGGCTATGGA GGTTGCTGCA
GAGCTGCACG CATGCTGCTC TGCTATGGCT GTCCCCTGTA TTTTCAAGGG GTCGTTCCGC
AAAGCCAACC GCTCTTCAGG AAGTTCGTTT ACCGGTATCG GTGACGTGGC TGCCCTGGAA
ATTCTCGCCG AAGTCCGTGA GCGTTTTTCC ATGCCGGTGC TGACCGATGT GCATGAGCGG
CAGGATATTG CCCTTGCCGC CCGCTATGTC GATGTGCTGC AGATTCCGGC CTTTCTCTGC
CGTCAAACAG ATCTTCTTGT TGCCGCCGGA GAGAGCGGGC TTGCCGTCAA TATCAAAAAG
GGGCAGTTTA TGGCGCCTGA AGATATGGCG CTTGCTGCCG ACAAGGTTGC TCAGACTGGG
AATTCGCGTA TCATGCTGAC CGAGCGAGGG ACCTCTTTCG GCTACCATAA TCTGGTGGTT
GATTTCAGGG GTATTGCCAG GATGGCCAGA GCGGGCTATC CTGTTGTCTA TGACGCGACG
CACAGCCTTC AGCTTCCCTC GGCGGCTAAC GGGGTTTCCG GTGGGGAACG TGAATTTATG
CTGCCGATGG CCCGCGCAGC GGTGGCAGCC GGTGTTCAGG CGATATTCTG TGAGGTTCAT
CCTGATCCTG ATAATGCCAG CTCGGATGCG GCAACCCAGA TTGCACTCAG GGACTTTCCC
GGCCTGTTTT TGCAGCTTCA GAAGCTGCAT GCCTGCCTAC AATCTTTGTA A
 
Protein sequence
MEKLLKFSIG PLSVPDDKSL FFIAGPCLIE SREMAMEVAA ELHACCSAMA VPCIFKGSFR 
KANRSSGSSF TGIGDVAALE ILAEVRERFS MPVLTDVHER QDIALAARYV DVLQIPAFLC
RQTDLLVAAG ESGLAVNIKK GQFMAPEDMA LAADKVAQTG NSRIMLTERG TSFGYHNLVV
DFRGIARMAR AGYPVVYDAT HSLQLPSAAN GVSGGEREFM LPMARAAVAA GVQAIFCEVH
PDPDNASSDA ATQIALRDFP GLFLQLQKLH ACLQSL