Gene Paes_2161 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPaes_2161 
Symbol 
ID6458826 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProsthecochloris aestuarii DSM 271 
KingdomBacteria 
Replicon accessionNC_011059 
Strand
Start bp2335689 
End bp2337122 
Gene Length1434 bp 
Protein Length477 aa 
Translation table11 
GC content51% 
IMG OID642726137 
ProductFAD-dependent pyridine nucleotide-disulphide oxidoreductase 
Protein accessionYP_002016810 
Protein GI194334950 
COG category[C] Energy production and conversion 
COG ID[COG1252] NADH dehydrogenase, FAD-containing subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.613284 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAAAGG TTGTGATCAT AGGTGCCGGC TTTGCGGGTC ATACTGCGGC TATGTACCTT 
GGCGACGCTA TAGGAAAGGA GCATGATATA ACCGTCATTC ACAAGTTTGA TATTTTCGGC
TTCGTTCCGT CATGGGTATG GCTCGGTATC GGTGCCGTCA AACCTGAAGA AACCACATTC
AAGTTAAAGC CTGTTTACGA TAAATTCAAT GTGAACTTTG TTCAGGGGAC GGTCACCTCT
GTTCATCCTG ATGAAAACTA TGTGATTGTC AATCAGGCCA ACAGTGGAGG AGAAGCAAGC
GTTGAGTACG ATTACCTCGT TGTTGCCACC GGTGCTCACA TGAACTATGA CGCGACGCCC
GGCCTTGGAC CAAAAAAATT CACCGAGTCG ATCTGTCATC TTGACAGTGC TATTCAGGCC
CGTGACTCCT ATCTCCAGCT TGTCGAGAAA ATGAAGCGCG GTGAACGTCA GCGTCTCGTT
ATCGGCACCG GCCATCCTAT GGCTGCGTGT CAGGGCGCCG CATTCGAATA TATCACCAAT
ATACACGCCG ATCTCACTCA GCGCGGCGTG AGGGATAAAG CCGAACTGGT CTATCTGACC
AACGAGCCCG CTCTCGGTGA TTTTGGCGTC AACGGTATCA ATGTTGTCAA ACCGGGCGGT
CGAATTGCTC GTGGCGGTGA TCTTATTGAT GCAGCCATGG ATGATTTTGG CATTGTCAAG
TCGATTCGAC GGGGCGTGAA GGAAGTTGAC GAGAAAAAAA TCTACTGGGA GGATTTCGAG
GGCAACTTCG GCGAAGACGA TTACGATTTC GCTATGCTGA TTCCGCAGTC CCGCGGCGTG
AAGTTTCCCT TCTTCGACAA GAACGGCGAA GATATCTCTT CAAAGGTGAC CAATCCCGGC
GGTTTTGTGC TTGCCGACGG CATCTACGGG CTCAGCTACG ATGAACTGGT CAAAACGCCT
GACGCATGGC CTGCCAACTA TCAGAACCCT CAGTATCCGA ATATCTTCTC GGCCGGTATC
GCATTTGCTC CTCCCGGACC GATCTCTGTG CCTCACGTAA CGAAGAACGG AACCTCTATC
ACTCCCGGGG CGCCGAGAAC AGGTATGATT TCCGGTGTTA TCGGCAGGGT CGTTGCGCTC
AATATTATCG ATCTCATCAA GGAAGGCCGG ATGACGCATC ACGAAAGAAT GTCCGAGATG
CTCGCGGTCT GTATCGCCTC GAACGGTAAG TCGCTCTGGA ACGGTTCTGC TATCGTGATG
ATTATCTATC CTATCGTTCC GGATCATACG CGTTATGATA ACAAGGAGGG GCGCGATCTC
TTTGTGACCA GAGTTGAACG TGGTCTTTCC GGCGCATGGC TGAAGCAGAT GGTCGAAACC
ACCTTTATGC ATAAGTTCAA GGGCAATCTT GGCTGGAAGT ATATCCCCGA GTAA
 
Protein sequence
MAKVVIIGAG FAGHTAAMYL GDAIGKEHDI TVIHKFDIFG FVPSWVWLGI GAVKPEETTF 
KLKPVYDKFN VNFVQGTVTS VHPDENYVIV NQANSGGEAS VEYDYLVVAT GAHMNYDATP
GLGPKKFTES ICHLDSAIQA RDSYLQLVEK MKRGERQRLV IGTGHPMAAC QGAAFEYITN
IHADLTQRGV RDKAELVYLT NEPALGDFGV NGINVVKPGG RIARGGDLID AAMDDFGIVK
SIRRGVKEVD EKKIYWEDFE GNFGEDDYDF AMLIPQSRGV KFPFFDKNGE DISSKVTNPG
GFVLADGIYG LSYDELVKTP DAWPANYQNP QYPNIFSAGI AFAPPGPISV PHVTKNGTSI
TPGAPRTGMI SGVIGRVVAL NIIDLIKEGR MTHHERMSEM LAVCIASNGK SLWNGSAIVM
IIYPIVPDHT RYDNKEGRDL FVTRVERGLS GAWLKQMVET TFMHKFKGNL GWKYIPE