| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Paes_2138 |
|---|
| Symbol | |
|---|
| ID | 6459885 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prosthecochloris aestuarii DSM 271 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011059 |
|---|
| Strand | - |
|---|
| Start bp | 2313364 |
|---|
| End bp | 2314710 |
|---|
| Gene Length | 1347 bp |
|---|
| Protein Length | 448 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 642726116 |
|---|
| Product | Na(+)-translocating NADH-quinone reductase subunit A |
|---|
| Protein accession | YP_002016789 |
|---|
| Protein GI | 194334929 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1726] Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrA |
|---|
| TIGRFAM ID | [TIGR01936] NADH:ubiquinone oxidoreductase, Na(+)-translocating, A subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.0000022983 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTGTGA TCAGAATCAG GAAAGGTCAT GACCTCAATA TCCTGGGTGT TCCGGAAAAA
AAACTTCAAC ATCTGCAACG GCCGGTTCGG CTTGAGCTTT GTCCCCTTGA TTTCAGAGGA
ATCAAACCAA AACTGCTTGT CCGCGAAGGG GAGCGCGTTA ATGCGGGAGG TGCGGTATAC
CGCGATAAAG GTCGTCCCGA CATCCTGTTT ACATCACCGG CATCCGGAAC GATCTCCTCA
ATAGCCTATG GCGAGCGTCG TACGATAACC GGCATAACCA TCGATCTTGA CAAGAGCGAT
ATCTTTGAGG ATTTTCGAGT CTCCGATGCA GACCATTCCG ACCCCTCCTC CATCCGTTCT
CTGCTGCTTA AGTCAGGCCT CTGGCCTGTG ATCCGACAGA GACCTTTTTC GGGCATTGCC
GATCCTGATG TCTCGCCCAA GGCGGTTTTT GTTCCTGCAA TGCCGACCGC GCCGTTTGCT
CCGGATATCT TCATGCAGCT TGACGGAAAA GATCGTGCTT TTCAATCCGG GCTGACTCTG
CTTGCTCGTC TGACTGGCAG CCCGGTTCAT CTGGTTATCG ATGAAAAGAA TTCTTCTCCT
CTTTTTACCG GCGCTGAAGA TGTTATCCTG CACCGTTTCA GCGGTCCGCA TCCGGCCGGT
AATGTCGGGA TCCATATTCA CCACATAGCG CCAATCCGGC ATCGAGATGA TCATGTCTGG
TATGTTCTGC CCCAGGACGT TGCGCGTATC GGAGCGTTCT TTCTGACAGG GAGGCTTCCG
GTTACAAAAG TGATGACTGT AGGGGGAGAG GCGGTAGAGC AACGCCAGTA TCTCGGTTTT
ATGCAGGGGT CTCTCATCGG CGATATTCTT GAGGGTAACC CTGTCAGCGA GCCTGCGCGC
ATCATTTCCG GAGATGTGCT TACCGGAACC CGCAGGGATC TGCAGAAGCC TATCGGGTTC
TATGATGAAG TCGTCTCGGT GATTCCTGAA AAAACCGGTC GTGATTTCAT TGGCTGGCTG
AGTCCGGGGA TGAGAAAGTA TTCAGTGACC AATCTCTTTC TTTCCCGCTT GTTTCCGTCC
GGGTCGTTCA GTCTCGATAC CGGCCTCAAC GGCAGTGAGC GGGTGATGAT ACCCTTCGGC
AATATCGAGT CGGTGCTCCC GATTGATATC ATTCCGACGT GGCTGATTAA AATGATTATC
GCAAGAGATA TCGACGAAAT GGAAAAACTT GGCATTTACG AGTGCGACCC GGAAGATTTT
GCCTTGTGCT CGTTTGTCGA TGCCTCAAAA ATGGAAATCG TGGACATTAT CCGCGACGGT
CTGGACTATA TTGAAAAGAA CGGATAA
|
|---|
| Protein sequence | MSVIRIRKGH DLNILGVPEK KLQHLQRPVR LELCPLDFRG IKPKLLVREG ERVNAGGAVY
RDKGRPDILF TSPASGTISS IAYGERRTIT GITIDLDKSD IFEDFRVSDA DHSDPSSIRS
LLLKSGLWPV IRQRPFSGIA DPDVSPKAVF VPAMPTAPFA PDIFMQLDGK DRAFQSGLTL
LARLTGSPVH LVIDEKNSSP LFTGAEDVIL HRFSGPHPAG NVGIHIHHIA PIRHRDDHVW
YVLPQDVARI GAFFLTGRLP VTKVMTVGGE AVEQRQYLGF MQGSLIGDIL EGNPVSEPAR
IISGDVLTGT RRDLQKPIGF YDEVVSVIPE KTGRDFIGWL SPGMRKYSVT NLFLSRLFPS
GSFSLDTGLN GSERVMIPFG NIESVLPIDI IPTWLIKMII ARDIDEMEKL GIYECDPEDF
ALCSFVDASK MEIVDIIRDG LDYIEKNG
|
|---|
| |