Gene Paes_2127 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPaes_2127 
Symbol 
ID6459662 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProsthecochloris aestuarii DSM 271 
KingdomBacteria 
Replicon accessionNC_011059 
Strand
Start bp2304862 
End bp2305719 
Gene Length858 bp 
Protein Length285 aa 
Translation table11 
GC content51% 
IMG OID642726105 
Productglycerophosphoryl diester phosphodiesterase 
Protein accessionYP_002016778 
Protein GI194334918 
COG category[C] Energy production and conversion 
COG ID[COG0584] Glycerophosphoryl diester phosphodiesterase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.292182 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTACAGGC ATTCCATTGA AATTCATGCC CACAGGGGCG GAAGAGACCT TTTTCCCGAG 
AATAGTATGT CGGCTTTTCT CAGGTCGGCT GGTCTTGGCG TCACCGCCAT TGAACTTGAT
CTTGTGATCT CTTCCGATCA CAGGATCGTT GTTTCCCATG ATCCCTGGAT GAATGAGCGT
CTCTGTCTTT CGCCTGATGG CGCTGAATTG AAAGAGTCCG ATCGGGAGCG CTTTCGGCTC
TATGGGATGA CATATGAGCA GATCAGGTCG TTTGATTGCG GAAAAGCTGA TCCCGATTTT
CCTTCGCAGC AGGCAATTGC AGGTTGTAAG CCCTTGCTTT CGGATGTTTT TGATGCTGTC
GAGACGGCAT GTGCTTCGAG GGGAAGGCCC GGTTCAATGG TCTATAACCT CGAAGTGAAA
TCCTGGCCGG AAAAGGTTGG CGTCTATCAT CCGGCACCTG ATCTCTATGC GCGTTTTCTT
GTCGATGGTA TCATGAGCAG TGGTGTGGAA AGCCGGATAA GGCTTCAGTC TTTTGACGTG
CATCTGCTTG ATGCGCTCAA CCGGCTTTTT CCGGGCCTCT CTCTCGGACT GCTTGTTGCA
CCCGGAGGTG ATGTGGAGAA GTTGCTCGCG CAGCTTTCCT GTGTGCCGGC ATTTGTCAAT
CCATTTTTCA GGGATGTGAC CGTCAAGCTT GTCGGTGAGC TTCATGCAAG ACAGTTCAGA
ACCGTTCCCT GGACCGTCAA TGAAGCCGAT GATATGCTCA AACTCATTTC GATGGGCGTC
GATGGTTTGA TCACCGATTA TCCTGAACGA GCGGCAGGTA TTGCCGGCTT TGCTGCCGAT
CGGAAAAATC GTGTATGA
 
Protein sequence
MYRHSIEIHA HRGGRDLFPE NSMSAFLRSA GLGVTAIELD LVISSDHRIV VSHDPWMNER 
LCLSPDGAEL KESDRERFRL YGMTYEQIRS FDCGKADPDF PSQQAIAGCK PLLSDVFDAV
ETACASRGRP GSMVYNLEVK SWPEKVGVYH PAPDLYARFL VDGIMSSGVE SRIRLQSFDV
HLLDALNRLF PGLSLGLLVA PGGDVEKLLA QLSCVPAFVN PFFRDVTVKL VGELHARQFR
TVPWTVNEAD DMLKLISMGV DGLITDYPER AAGIAGFAAD RKNRV