Gene Paes_2109 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPaes_2109 
Symbol 
ID6459417 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProsthecochloris aestuarii DSM 271 
KingdomBacteria 
Replicon accessionNC_011059 
Strand
Start bp2288579 
End bp2290645 
Gene Length2067 bp 
Protein Length688 aa 
Translation table11 
GC content36% 
IMG OID642726088 
Productprotein of unknown function DUF87 
Protein accessionYP_002016761 
Protein GI194334901 
COG category[R] General function prediction only 
COG ID[COG0433] Predicted ATPase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000368581 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCAAGA CATATCGCCT GACATTAATA GCCCTCTCCT TATTTTTTCT CTTAGTTGTT 
GGTTATGGCA TTACCGGCAA TATGGCATTT GTCCTAAATG ATTTCTGGTT TACTTCCGGA
CTCCTTTTGC TCATTCTATT ATCATTAATT GACCAACCTC ATTTCTCCAA AGATTCAAAT
ATATTTATCA ATGCAGTAAC AGCTTGTGTG TCGTTGCTTC TAGTCGAAAA AGCTAATAGG
GACTTTATAT TTTGGTTGTT TTTCTCAATG ACCATATATC TTCTTTTAAG TAGTTACTTA
CTTCTTTGGG TACGGCAAAA GCAGCTAGTG GAAGAATCAA ATGCTGTAAA GTTTTTTTCA
AGATTCAATA GGGAAATAGG CAAACCAGAG GCCTTGTTTT CATCTTTTTT CCTATGGGGG
ACTTTTAAAC AGTTTGGAGC AGCATCAAAT GAGTTCAACG CGTTACTCCT TTTCTGGGTG
ATATTTATTA TACTAAACAT CCCCTCGCTT TCTAGAACAA TTGAAGATCT TTTTGTTTCC
AAAAAGGAAA AGCGAAGCGA AGGTGCTCTT GGCCAGATAT TTGGTGTTCA ATCCAAAAAC
ACCTTTTTGG TCAAAATGTA TGACTCCTCA ACGCGAGTTG CTAAAGCACG TATTTTTGAT
TTTGTCGAGT TTCAATATTC AACAGATCAA TTAGTAAGAA GAGGAATTCT ATTAGATACT
TATCTGTTAA ATCAAGAACA GTGGGTAAAA GTACTAACAA ATCCCCAAAT TGAAAATATT
TTCGCTGAAA CTAATCATTT AGAAAAACAC ACTCTTGATG TTGTTTACAA ATTAAAAGAC
ATCCCAGAGA ACGAGTTTCT TCAAAGATTT GTAGGCATTA TCACTGACAG TAGCACCATC
AATAAAATAC GGTTCATCTT TAATTCAAAA ATTGAAATTT ACGAAGGCCA ACTTCTCGAA
GTTGCAATAA ATAATACGAC GGTACTCTAT CAAATAGTCG AGGGTGTAGC TAAAATAGAA
ACCTTAGAGC ATAAAAACCA GACAGGTTTA ATTATCGGCG AAGCAATTCA ATTAGGGACC
TGGAATAAAG AAAAATTTCA ATTCGAACAA TTTGTTTGGG TTCCTGCAAT CAATTCTCCT
GTTTTCATAG CGTCTGATAT AGAAGAACCA GAATTAGAGC AAGATGAGTA TGTTATAGGG
AATATACCCA ACACAAATTA CCCTGTTACA TTAAATAAGA GGACGGCCAT GTCACATCAT
CTTGCGGTAA TTGGTGTTAC TGGCACAGGA AAGTCTATAT TCGCAAGAAA TTTAATAAGA
GAATATCTCA ATGATTCAGA TGTGAAAATT ATCTGTGTTG ATTTTACTGG CGAATATGAA
GGTAAGTTTC ACGATCTTAA TCCAAAACAA GTAATTGATA AGACAGTATC TGGCCAATTA
TTCAAGGATA TTGACTTTAT TGAAAGAGAA ATAGGAGGCA ACTACAACAA AGATACAGAC
GCATCGAGAG CGAGGAAATT TGAGGTATCA AGTAAAATTC ATGCTGAGGT GAAAAGCTAC
CTTGAAGGTG ATGATCAATT AGCAATTTTC GAATTACCTC ATGTGGACAA CACATCTGGA
GTTCTTACTT ATACCAAAGC ATTTTTCAAA ACACTGTTTC AAATTGCAAA GCAAGAAGGC
AATTATGGAA AGCGAGTTTG TTTAGTGCTA GAAGAAGCGC ACACTATTGT ACCTGAGTGG
AATTTTTCTG GAGTTTCCGA CAAAGTCTCG CAACCGTTAT TAAACAGTAT TGCCCAAATT
GCATTACAAG GCAGGAAGTA TAACGTCGGT TTAATGGTAA TAGCGCAACG TACTGCTAAT
GTTTCAAAAA CCATTTTAAC TCAGTGCAAT ACCATTATTT CTTTTCAAGA ATTTGATAAG
ACTAGTAGTG ATTTTCTAGC CAACTATTTT GGACAAGATA TTGTAGGTAG CCTCACAAAG
TTACAATTTA GACAGGCTAT AGCCGCAGGC AAGGCCTTCC GGTCAAGTGT TCCTATGATA
TTTGAAGTTC CCGAAATAAC AGAATAA
 
Protein sequence
MSKTYRLTLI ALSLFFLLVV GYGITGNMAF VLNDFWFTSG LLLLILLSLI DQPHFSKDSN 
IFINAVTACV SLLLVEKANR DFIFWLFFSM TIYLLLSSYL LLWVRQKQLV EESNAVKFFS
RFNREIGKPE ALFSSFFLWG TFKQFGAASN EFNALLLFWV IFIILNIPSL SRTIEDLFVS
KKEKRSEGAL GQIFGVQSKN TFLVKMYDSS TRVAKARIFD FVEFQYSTDQ LVRRGILLDT
YLLNQEQWVK VLTNPQIENI FAETNHLEKH TLDVVYKLKD IPENEFLQRF VGIITDSSTI
NKIRFIFNSK IEIYEGQLLE VAINNTTVLY QIVEGVAKIE TLEHKNQTGL IIGEAIQLGT
WNKEKFQFEQ FVWVPAINSP VFIASDIEEP ELEQDEYVIG NIPNTNYPVT LNKRTAMSHH
LAVIGVTGTG KSIFARNLIR EYLNDSDVKI ICVDFTGEYE GKFHDLNPKQ VIDKTVSGQL
FKDIDFIERE IGGNYNKDTD ASRARKFEVS SKIHAEVKSY LEGDDQLAIF ELPHVDNTSG
VLTYTKAFFK TLFQIAKQEG NYGKRVCLVL EEAHTIVPEW NFSGVSDKVS QPLLNSIAQI
ALQGRKYNVG LMVIAQRTAN VSKTILTQCN TIISFQEFDK TSSDFLANYF GQDIVGSLTK
LQFRQAIAAG KAFRSSVPMI FEVPEITE