Gene Paes_2098 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPaes_2098 
Symbol 
ID6459466 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProsthecochloris aestuarii DSM 271 
KingdomBacteria 
Replicon accessionNC_011059 
Strand
Start bp2279142 
End bp2280125 
Gene Length984 bp 
Protein Length327 aa 
Translation table11 
GC content52% 
IMG OID642726080 
ProductIntegrase catalytic region 
Protein accessionYP_002016753 
Protein GI194334893 
COG category[L] Replication, recombination and repair 
COG ID[COG2801] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGATAG AAGAAGCACA TGGAAACGGA GCCCGTTACA GCAAGGCCTG TGAGGTTGTT 
GGGATCTCTC ATCGCACCCT CCAGCGCTGG AAGCAATGTG GCCTGAAAGA CCGACGCAAA
GGGTCACAGA AAACCGTTGT GAGAAAGGTT CCTCAGGAAA CCAGGGATGA AATCATCAAT
GTCTGTAACG AGCCTCGGTT CCGGGATCTG ACACCGTATG AAATCGTGCC CCAGCTTCTG
GAAGAAGGCC GCTATCTGGC TTCAGAACGA ACGATCTACC GTATCCTGAG GAAAGCTGAT
CAGGTGCACC ATAGGAGTGA GCTGCGCGTC GGTTACCGTC ATGCCAAGCC GCCGGAACGC
AAGGCTACAG GCCCGAATCA GGTGTACACA TGGGACATCA CCTATATGGG GCGTACGGTA
AGAGGCCTAT TCTATTACGC GTATGTTGTC AAGGATCTCT TTGACAGATC CATCGTCGGC
TGGGCGGTTC ACGAAGAAGA AAGCGAAAAG CACAGCCGAG CTCTCTTCGC CCGGATACTG
AACGGAGGCA AGGTAAAACT CAAGGCGCTT CACGCTGATA ACGGTCACCC GATGAAAGGT
GATACGCTGA TGGCCCTTCT GCAAAAGCTC AATGTTGCAG TCTCGCACAG CAGGCCACGG
ACCAGCAATG ACAACTCCTT CATCGAGTCG CTGTTCAAGA CGATGAAGTA CCATGTCACC
TATCCGAATG CCTTTGATAC GCTTGAAGAT GCCCGCAGCT GGATGGGCGA CTTCGTGCAC
TGGTACAATA CCGAACACCT GCATTCTTCA ATTGGCTACG TAACACCGCA TCAGATGCGA
CACGGACAGG CAGAATCGAT TTTCGAACTT CGAAATGAGG AAATAAATCA GGCCAGACAG
TTGCATCCTG AACGCTGGGG TTCACGACCA GCAAAGCAAT GGATTGTTAA CCGGGAAGTG
GTGCTCAACC CGGACAAAAA GTGA
 
Protein sequence
MLIEEAHGNG ARYSKACEVV GISHRTLQRW KQCGLKDRRK GSQKTVVRKV PQETRDEIIN 
VCNEPRFRDL TPYEIVPQLL EEGRYLASER TIYRILRKAD QVHHRSELRV GYRHAKPPER
KATGPNQVYT WDITYMGRTV RGLFYYAYVV KDLFDRSIVG WAVHEEESEK HSRALFARIL
NGGKVKLKAL HADNGHPMKG DTLMALLQKL NVAVSHSRPR TSNDNSFIES LFKTMKYHVT
YPNAFDTLED ARSWMGDFVH WYNTEHLHSS IGYVTPHQMR HGQAESIFEL RNEEINQARQ
LHPERWGSRP AKQWIVNREV VLNPDKK