| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Paes_2072 |
|---|
| Symbol | |
|---|
| ID | 6459937 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prosthecochloris aestuarii DSM 271 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011059 |
|---|
| Strand | - |
|---|
| Start bp | 2255121 |
|---|
| End bp | 2257475 |
|---|
| Gene Length | 2355 bp |
|---|
| Protein Length | 784 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 642726056 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002016729 |
|---|
| Protein GI | 194334869 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG5617] Predicted integral membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.404123 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAAGAACG CACTCCGTCC ATATTTTCTG GTTGCTTTCG TTTTTTGCGC GATGGTTGCC
ACTCTCCTGT ATCAGGTCCT TTTTCTCGGT ATGGTGCCGT CATCGCCAGA CAGTACCGGA
CCGATGGCGA CGTCGATGGC GCTCGACGCC CTGCGCGAAT CTTCAGGCAT GTACCCACTG
TGGCAGCCAT GGTCGTTTTC CGGTATGCCG ACAGTCGAGG CATTTACCTA TCTGAACGGG
CTCTATTATC CCGGTATCGC GCTCAGCTTG TTTCACATTG ACGGTCTGCT CCTGCAACTC
CTGCATCTCG TGTTTGCCGC GATGGGGGGG TATGTGCTGC TTCGTTTTTT CAGACTGCGT
CATATGGCCG CTTTTCTTGG GGGCGCGGCC TTCATGCTCA ATCCCTATCT GGTGACGATG
TTTGTCTACG GGCACGGCAG TCAGCTGATG AGTGCAGCCT ATATGCCCTG GGTGTTCTGG
GCCGGCTTGA GGGTTCTCGA TAGTCGAAAA ATCTACGATA TCGCTTTGCT GGCACTTTTT
GCCGGCTTGC AGCTGCAGCG GGCTCATGTG CAAATTGCCT ATTATACCTG GATGTTTCTG
TGTCTGCTGA TAGTGATCAA TGTCGTTGTC AGATATACAA CTCTTCGTGA AACCGCCGGG
AAACTGGCGG CAGTATCTCT GTCGCTTGTG CTTGCATTGG CATTGGCGGC GGCAGTCTAC
ATGCCTGCCC TGGCCTATAC GCCGTTTTCG GTTCGCGGCG CTTCAGCTGG AGGCGGGGCA
GCATACGGAT ATGCGACGAT GTGGTCAATG CATCCGACCG AACTGCTGAC CTTTCTGGTT
CCCGGTTTTT TCGGTTTTGG CGGTATAGCG TACTGGGGAC ACATGCCGTT TACCGATTTT
CCCAATTATG CCGGTCTGAT TATTCTGCTG CTTGCTCTTG GCGGGGCATG GGCCGGACGC
CGCGAGCCGT TTGTCTGGTT TCTGGTTTCC TCGATGCTCG TTGCTCTGTT GCTCTCATTC
GGCAGTTTCT GGAGTCCGTT GTATGACCTG TTCTACCATT TTGCGCCGTT TTTCAGCAGG
TTTCGGGTGC CTTCGATGGT GCTGATCGTG GTCTCGCTCG ACCTTTCACT GCTTGCGGGT
TTCGGTTTGC ACGCTCTCGG CAAGGGTCTT GATAAGGGCG CTATCAGGAT CCTTAAAGGC
GGCTCGTTAG TGCTGGCTCT CTTTATTGTT TTTTTTCTTT TGTTCGAACC TTCCATCGAA
TCATGGTTCC GCAGCGCCTT TCCTCTTCCC AATGTTGAGG GGGTGCAGCT TGTTCGTCTT
ATCGAGGATG CCCGTTGGAA TCAGCTGAAA GGAAGCCTGC AGGGCGTTGT CCTCGGTTCT
GCCTTGTTTT GCGGGCTTCT CTGGCTTTCT ATTCGTCAGG TTTTCTCCGA CCGGGTAACA
CTGCTTTTCG TGGCGGCGTT AGCGCTTGGT GACATTCTGC TTGTCGATCG TCAGATTGTC
GATCCGTCAA GGGACTCGTT ACGTTCTTCG CAGCTTCAGG CGGAGGCTGT TCTTGACAAG
GTGTTCAGTG ATGGCGATGT GGCTGATTTT TTGAAAAACG AACCGGGCAT CTTCAGAATT
TATCCCGCTG GCGGGCTTTT TGGTGAGAAC CGTTTTGCGG CTGCCGGACT GGAGTCGGTC
GGAGGGTATC ATCCGGCCAA AATAGCGCGT TATGATGCAC TGCTGAAGCG AACAGCAAAT
CTTGCCGATA CTGGTGTACT TCGGATGCTC AATGTAGGTT ATGTTATTGC TCCCTCTCCT
CTTGATCATC CTGAGCTGGA GGGCGTTTAT GAAGGAATGC TTCGTCTTGT GCGGGGCAGG
CAGGATGTTT GGGTTTACCG CCTCCGCGAC CCTATGCCGA GAGCATGGTT TGCTCTGGGG
GCAACGGCAT CAGAGTCTGC GGAACAGAGT CTTTCGGGTA TGCTGCAAAG CTCGAGCGGT
CCGGCTGAGA TGGTGTTTGT CGAGGATGGC GGATGGGAAG GGCAGAGATC GTTCGCCCGC
GGAGAGGTGC TTGCAATCGA TAGAGGTCCG GAACGGTTAT CGATGAACGT CAGTTCGGAA
GGAGATGCAC TCCTTGTTGT AAGCGAGGTT TTTTACCCGC AGGGCTGGAA GGCTTCTATG
GACGGCTCTC CCGTCAGAGT CCACCCTGTC AACGGGGTTA TCCGGGGAGT GCTTGTTCCT
GAGGGTGAGC ATCACATCGT TTTCAGTTAT GACCGTACGC TTTTTGAAAA CGGGCGACGC
TATAGCCTTG CGGCAGCCTT GCTGATAGTG ATGCTCTTTG CCGGCGGGAC GCTACTGCGA
CGCAAGGCAT CGTAA
|
|---|
| Protein sequence | MKNALRPYFL VAFVFCAMVA TLLYQVLFLG MVPSSPDSTG PMATSMALDA LRESSGMYPL
WQPWSFSGMP TVEAFTYLNG LYYPGIALSL FHIDGLLLQL LHLVFAAMGG YVLLRFFRLR
HMAAFLGGAA FMLNPYLVTM FVYGHGSQLM SAAYMPWVFW AGLRVLDSRK IYDIALLALF
AGLQLQRAHV QIAYYTWMFL CLLIVINVVV RYTTLRETAG KLAAVSLSLV LALALAAAVY
MPALAYTPFS VRGASAGGGA AYGYATMWSM HPTELLTFLV PGFFGFGGIA YWGHMPFTDF
PNYAGLIILL LALGGAWAGR REPFVWFLVS SMLVALLLSF GSFWSPLYDL FYHFAPFFSR
FRVPSMVLIV VSLDLSLLAG FGLHALGKGL DKGAIRILKG GSLVLALFIV FFLLFEPSIE
SWFRSAFPLP NVEGVQLVRL IEDARWNQLK GSLQGVVLGS ALFCGLLWLS IRQVFSDRVT
LLFVAALALG DILLVDRQIV DPSRDSLRSS QLQAEAVLDK VFSDGDVADF LKNEPGIFRI
YPAGGLFGEN RFAAAGLESV GGYHPAKIAR YDALLKRTAN LADTGVLRML NVGYVIAPSP
LDHPELEGVY EGMLRLVRGR QDVWVYRLRD PMPRAWFALG ATASESAEQS LSGMLQSSSG
PAEMVFVEDG GWEGQRSFAR GEVLAIDRGP ERLSMNVSSE GDALLVVSEV FYPQGWKASM
DGSPVRVHPV NGVIRGVLVP EGEHHIVFSY DRTLFENGRR YSLAAALLIV MLFAGGTLLR
RKAS
|
|---|
| |