| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Paes_2048 |
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| Symbol | rplR |
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| ID | 6458846 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prosthecochloris aestuarii DSM 271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011059 |
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| Strand | - |
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| Start bp | 2240461 |
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| End bp | 2240820 |
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| Gene Length | 360 bp |
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| Protein Length | 119 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 642726031 |
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| Product | 50S ribosomal protein L18 |
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| Protein accession | YP_002016705 |
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| Protein GI | 194334845 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0256] Ribosomal protein L18 |
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| TIGRFAM ID | [TIGR00060] ribosomal protein L18, bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.00722751 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.437554 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGGACAAA ACGATAAAGC TGCCCGCAGG CAGAAAATCA AGCTCCGCAG CAAAACAAGA
GGGCAGGGAA CAGCTGCAAG TCCAAGACTT TGTGTATTCA GAAGCGTTTC ACAGATCTAC
GCTCAGCTTG TAGATGATGT CAACGGAGCG ACACTCCTTG CTGTTTCAAG TATGGCGAAA
GAAAACAAAG AGCTGAAGGG TACAAAAACA GAGGTCAGCC ATACGATCGG CAAGCAGATT
GGTGAAAAGG CTCTCGCACA GGGAATTACG AAAGTTATAT TCGACCGTAA TGGCTTCCGA
TATCATGGCC GTGTTAAAGC CCTTGCTGAA GGTGCCAGGG AAGCGGGACT GGTCTTTTAA
|
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| Protein sequence | MGQNDKAARR QKIKLRSKTR GQGTAASPRL CVFRSVSQIY AQLVDDVNGA TLLAVSSMAK
ENKELKGTKT EVSHTIGKQI GEKALAQGIT KVIFDRNGFR YHGRVKALAE GAREAGLVF
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