| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Paes_2044 |
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| Symbol | secY |
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| ID | 6458887 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prosthecochloris aestuarii DSM 271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011059 |
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| Strand | - |
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| Start bp | 2237784 |
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| End bp | 2239109 |
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| Gene Length | 1326 bp |
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| Protein Length | 441 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 642726027 |
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| Product | preprotein translocase subunit SecY |
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| Protein accession | YP_002016701 |
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| Protein GI | 194334841 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0201] Preprotein translocase subunit SecY |
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| TIGRFAM ID | [TIGR00967] preprotein translocase, SecY subunit
[TIGR01131] ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes) |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.00113194 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.318737 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAGCTGA CTGAGAGCTT ACAGAATATC AATAAAATCC CGGAATTGCG GCAGCGGATA
CTCTATACGC TGCTGCTCTT GTTTATTTAC AGACTTGGTT CTCATATCAC TATTCCAGGT
GTCGATGCTG CAGCGGTAAG TAATGCTTCA TCGTCTCATT CCAATGACCT CTTCGGTCTT
TTCGATCTCT TCGTCGGTGG TGCATTTGCC CGAGCCTCGA TTTTTTCGCT TGGTATCATG
CCCTACATCT CAGCCTCGAT TATCGTTCAG CTTCTCGGAG CGGTCACTCC CTATGTGCAG
AAGCTTCAGA AAGAGGGTGA GGAGGGTCGA CAGAAGATTA ATCAGTACAC CCGATACGGT
ACGGTACTCA TTGCCGCGCT ACAGGCGTGG GGCGTGAGCG TCAGTCTTGC AAGTCCGTCG
TCATTCGGAA CCATAGTCGT TCCTGACCCC GGCTTTTTCT TCATGATGAC GACCGTACTT
ATTCTTACAG CAAGCACTGT TTTTGTGATG TGGCTCGGAG AAAAGATTAC CGAGAGGGGT
ATAGGAAACG GCATCTCCCT TATCATCATG ATCGGTATCC TCGCCAGATT TCCCCAGTCT
GTCATCGCGG AGTTTCAATC GGTTTCGCTG GGAAGCAAAA ACTGGATCAT AGAGTTTATT
ATTCTTGCTC TCATGGTTCT GATTGTTGCA GCTGTCGTGG TCCTTACCGT AGGAACCAGA
AGGATTCCTG TTCAGCATGC AAAAAGGGTT GTCGGTCGCA AAATGTACGG CGGATCGACG
CAGTACATTC CTATGCGTGT CAACACCGCT GGTGTGATGC CCATTATTTT TGCACAGTCG
ATCATGTTTC TTCCCAATAC CTTTCTGTCG TTTTTCCCTG AGAGCGAAGT GATGCAGAAC
GTGGCGACGA TCTTTTCATA CGACTCATGG TGGTACGCCC TGATGTTTGG AACGATGATT
GTCTTCTTTA CCTATTTTTA TACCGCGATT GCATTCAATC CCAAGGAGGT GGCCGACACC
ATGCGTCGAC AGGGCGGGTT CATTCCGGGT GTTCGTCCCG GTAAAAGCAC CGCTGATTTT
ATCGACAATA TTCTTACGAG AATAACGCTC CCTGGAGCTA TATCGTTAGC TTTCATAGCT
GTTCTGCCGA CCTTTTTGAC AAAATTTGCA AACGTGACGC CCGGATTCGC TCAATTCTTT
GGCGGAACGA GTCTTCTTAT TATTGTCGGT GTCGGACTCG ATACCCTTCA GCAGGTAGAA
AGCCATCTCC TGATGAGGCA TTATGACGGA TTTATGAAAT CAGGCAAAAC ACGCGGCCGT
CGATAA
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| Protein sequence | MKLTESLQNI NKIPELRQRI LYTLLLLFIY RLGSHITIPG VDAAAVSNAS SSHSNDLFGL
FDLFVGGAFA RASIFSLGIM PYISASIIVQ LLGAVTPYVQ KLQKEGEEGR QKINQYTRYG
TVLIAALQAW GVSVSLASPS SFGTIVVPDP GFFFMMTTVL ILTASTVFVM WLGEKITERG
IGNGISLIIM IGILARFPQS VIAEFQSVSL GSKNWIIEFI ILALMVLIVA AVVVLTVGTR
RIPVQHAKRV VGRKMYGGST QYIPMRVNTA GVMPIIFAQS IMFLPNTFLS FFPESEVMQN
VATIFSYDSW WYALMFGTMI VFFTYFYTAI AFNPKEVADT MRRQGGFIPG VRPGKSTADF
IDNILTRITL PGAISLAFIA VLPTFLTKFA NVTPGFAQFF GGTSLLIIVG VGLDTLQQVE
SHLLMRHYDG FMKSGKTRGR R
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