Gene Paes_2040 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPaes_2040 
SymbolrpsM 
ID6459486 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProsthecochloris aestuarii DSM 271 
KingdomBacteria 
Replicon accessionNC_011059 
Strand
Start bp2236094 
End bp2236471 
Gene Length378 bp 
Protein Length125 aa 
Translation table11 
GC content49% 
IMG OID642726023 
Product30S ribosomal protein S13 
Protein accessionYP_002016697 
Protein GI194334837 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0099] Ribosomal protein S13 
TIGRFAM ID[TIGR03631] 30S ribosomal protein S13 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000297672 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.161129 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGGATAG CTGGGGTAAA TTTACCGTTA AACAAACATG CCGTCATAGC CTTGACCCAT 
GTTTATGGTA TCGGCAAAAC ATCGGCCAGA AATATTCTGG AGAGAGCCGG TATCGATCCT
GCGAAAAAAA TTGCAGAAAT GAGCGACGAA GAGGCTCATG CCATCAGAGA GATTATTGCC
GAGGAGTACA AGGTTGAAGG GCAGGCTCGA GGTTTGCAGC AGCTTGCTGT AAAACGTCTT
ATGGATATCG GATGCTACCG TGGTCTTCGC CATCGTCGTT CGCTTCCTGT TCGCGGTCAG
CGAACCCAGA CCAATGCCAG AACCAGAAAA GGTAAGCGTA AGACGGTCGC TGGTAAGAAG
AAAGCGGTCA AGAAGTAA
 
Protein sequence
MRIAGVNLPL NKHAVIALTH VYGIGKTSAR NILERAGIDP AKKIAEMSDE EAHAIREIIA 
EEYKVEGQAR GLQQLAVKRL MDIGCYRGLR HRRSLPVRGQ RTQTNARTRK GKRKTVAGKK
KAVKK