Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Paes_2040 |
Symbol | rpsM |
ID | 6459486 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prosthecochloris aestuarii DSM 271 |
Kingdom | Bacteria |
Replicon accession | NC_011059 |
Strand | - |
Start bp | 2236094 |
End bp | 2236471 |
Gene Length | 378 bp |
Protein Length | 125 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 642726023 |
Product | 30S ribosomal protein S13 |
Protein accession | YP_002016697 |
Protein GI | 194334837 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0099] Ribosomal protein S13 |
TIGRFAM ID | [TIGR03631] 30S ribosomal protein S13 |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.000000297672 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.161129 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGGATAG CTGGGGTAAA TTTACCGTTA AACAAACATG CCGTCATAGC CTTGACCCAT GTTTATGGTA TCGGCAAAAC ATCGGCCAGA AATATTCTGG AGAGAGCCGG TATCGATCCT GCGAAAAAAA TTGCAGAAAT GAGCGACGAA GAGGCTCATG CCATCAGAGA GATTATTGCC GAGGAGTACA AGGTTGAAGG GCAGGCTCGA GGTTTGCAGC AGCTTGCTGT AAAACGTCTT ATGGATATCG GATGCTACCG TGGTCTTCGC CATCGTCGTT CGCTTCCTGT TCGCGGTCAG CGAACCCAGA CCAATGCCAG AACCAGAAAA GGTAAGCGTA AGACGGTCGC TGGTAAGAAG AAAGCGGTCA AGAAGTAA
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Protein sequence | MRIAGVNLPL NKHAVIALTH VYGIGKTSAR NILERAGIDP AKKIAEMSDE EAHAIREIIA EEYKVEGQAR GLQQLAVKRL MDIGCYRGLR HRRSLPVRGQ RTQTNARTRK GKRKTVAGKK KAVKK
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