Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Paes_2037 |
Symbol | |
ID | 6459696 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prosthecochloris aestuarii DSM 271 |
Kingdom | Bacteria |
Replicon accession | NC_011059 |
Strand | - |
Start bp | 2233993 |
End bp | 2234979 |
Gene Length | 987 bp |
Protein Length | 328 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 642726020 |
Product | DNA-directed RNA polymerase subunit alpha |
Protein accession | YP_002016694 |
Protein GI | 194334834 |
COG category | [K] Transcription |
COG ID | [COG0202] DNA-directed RNA polymerase, alpha subunit/40 kD subunit |
TIGRFAM ID | [TIGR02027] DNA-directed RNA polymerase, alpha subunit, bacterial and chloroplast-type |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.000319536 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.322219 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATATACC AGATGCAGAT GCCTGAGCGA ATCGAGGTGG ATGAGGCAAC ACATAGTGAG AGTATAGGAC AGTTTGTGGC TCAGCCTCTG GAAAGAGGAT ATGGTGTAAC CTTAGGTAAT GCAATGCGCC GGGTATTGCT GGCATCTCTG CCGGGTACGG CTATTACCGG TATAAAAATA GATGGTGTTT TTCATGAGTT TTCGACAATT GACGGCGTTC GTGAAGATGT TCCGGAAATT GTCCTTAACC TGAAAAAGGT GCGTTTTAAA TCGACGACGA AGCGAAGCTG TAAAACCAGT CTATCCATCG AAGGGCCTGC TGATTTTAAA GCCGGAGATA TCGTCGCTCA GGAAGGTGAG TTTGAAGTCC TCAACAAGGA CATGCATATT GCAACCCTTA ATGGTGATGC AAAACTCAAT ATAGATATTT ATATCGGACG AGGCAGAGGC TATGTTCCTG CTGAAGAAAA TCGGGGCGAA GGTATGCCGA TCGGCTTTAT CGCTATCGAT TCGATTTTTA CACCGATCAA GAATGTCAAG TTCTCTGTAG AAAATACCCG TGTCGGTCAG AGAACAGACT ATGAGAAAAT GATTCTCGAC GTTGAAACCG ATGGTTCGAT TTCCCCTGAT GATTCAATCA GTCTTGCAGG AAAGGTCATC AACGAGCATG TTTCTCTTTT CGCCAATTTT TCTCCTACAG AGGAAGAGTT CGCCGAAGAA GAGTACAAGC AGCAGGATGA CGAGTTTGAA AATATGCGAA AACTCCTTCA GACCAGAATT GAGGATCTTG ATCTTTCGGT CCGATCACAT AACTGTCTGA GACTTGCTGA AATAGATACT CTGGGTGACC TGGTTTCCCG TAAAGAGGAC GAACTGTTGA CATACAAGAA CTTCGGGAAA AAGTCGTTGA CAGAGCTTAA AGAGCAGTTA GACAAATGTG AATTGAAATT TGGTATGGAT ATTACCAAGT ATCAGATGAA GAGCTAA
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Protein sequence | MIYQMQMPER IEVDEATHSE SIGQFVAQPL ERGYGVTLGN AMRRVLLASL PGTAITGIKI DGVFHEFSTI DGVREDVPEI VLNLKKVRFK STTKRSCKTS LSIEGPADFK AGDIVAQEGE FEVLNKDMHI ATLNGDAKLN IDIYIGRGRG YVPAEENRGE GMPIGFIAID SIFTPIKNVK FSVENTRVGQ RTDYEKMILD VETDGSISPD DSISLAGKVI NEHVSLFANF SPTEEEFAEE EYKQQDDEFE NMRKLLQTRI EDLDLSVRSH NCLRLAEIDT LGDLVSRKED ELLTYKNFGK KSLTELKEQL DKCELKFGMD ITKYQMKS
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