Gene Paes_2033 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPaes_2033 
SymbolcysS 
ID6459874 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProsthecochloris aestuarii DSM 271 
KingdomBacteria 
Replicon accessionNC_011059 
Strand
Start bp2230009 
End bp2231454 
Gene Length1446 bp 
Protein Length481 aa 
Translation table11 
GC content53% 
IMG OID642726016 
Productcysteinyl-tRNA synthetase 
Protein accessionYP_002016690 
Protein GI194334830 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0215] Cysteinyl-tRNA synthetase 
TIGRFAM ID[TIGR00435] cysteinyl-tRNA synthetase 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.570064 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0642748 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCACTCT GGATATACAA TTCGCTGAAC CGCGTGAAAG AGGAATTCAT CCCGCTGCAG 
GATGGAGTTG TCACCATGTA CGTTTGCGGT CCAACCGTCT ACGGGCACGC TCACCTGGGG
CATGCTAAAA GCTACGTATC GTTTGATGTC GTAGCCAAAT GGCTGCGCCA TAGCGGCTAC
CGTGTCAAAT ATATCCAGAA CATTACCGAT GTAGGCCATC TTACCGACGA CTCCGATGAA
GGAGAGGATA AAATCGCTCG CCAGGCCCGC AAAGAGCGGA TCGATCCTAT GGAGATCGCC
CAATACTATA CGCGGAGTTA CTACGAGGAT ATGGACCGTC TTGGCATAGA CCGTCCGAAT
ATCGCCCCGA CAGCGACAGG CCATATCCCG GACCAGGTTA ACCTGATCAG CACCCTTATC
GAAAAAGGAC ACGCCTACGA GGTCAACGGC AATGTCTATT TTTCCGTCGA ATCGTTCAAA
GAGTACGGTA AGCTCTCGGG TCGGACGACA GAGGAAGCCC GCCAGTCAGG CGGCAGGGTA
GAAACGCGTT CAGAAAAACG CCATCCGGCG GATTTCGCGC TCTGGAAAAA AGCTGAACCC
GGCCATCTGA TGAAGTGGGA CTCCCCCTGG GGAAGCGGCT ATCCAGGCTG GCACGCCGAG
TGCTCGGCCA TGGCGATGAA GTATCTGGGA GAGACGATTG ACATCCACGG CGGCGGCATG
GAAAACAAGT TTCCTCATCA TGAGTGCGAG ATCGCTCAAT CAGAAGCTGC GACGGGAAAA
CCCTATGTGC GCTACTGGAT GCACAACAAT ATGGTGACGG TCAACGGCAC CAAGATGGGC
AAATCGCTGG GAAACTTCAT CAACCTGAAA GATATCTTCA AGCGCTTTGC CCCTGTCGTT
ATCCGCTTCT TCATTCTGCA ATCACATTAC CGCTCTCCCC TTGATTTTTC AGAAACAGCA
ATAGATGCAT CCAGAACAGG ACTTGAAAAA CTGCAGGACA CCTGGACAAG ACTGCAGCAG
GCAGCACCCG GCTCCGGAGA GATCGAAACC CGGCCGTTCC AGGAACGCCT GACCGAAGCG
ATGAACGATG ATTTCAATAC ACCCATTGCG ATTGCTGTTC TCTTTGATCT TGCAAAAGCA
GTGAACACTG CCATTGCAGC CCCTTCAGGC CTGAATCAGG ACTCCCTCGA TCGATGCATC
AGCCTTTTTC GGTCGTTTGG AGAGGAGGTT CTGGGCATTC TCCAAAATCC TGCGACAGAA
AAAGGGAAAA CCAATAACGA GGATGAAGAG ACCCTTGACA CCGTGATGAA CCTCCTGATC
GACATTCGGT CACGAGCACG GTCCGGAAAG GATTATGAAC TGAGCGATCT GATCCGCGAC
AAACTCGCCG AAGCGGGCAT CACTATGAAA GACACTCGCG AAGGCACCGA ATGGAGCAGG
TCATGA
 
Protein sequence
MSLWIYNSLN RVKEEFIPLQ DGVVTMYVCG PTVYGHAHLG HAKSYVSFDV VAKWLRHSGY 
RVKYIQNITD VGHLTDDSDE GEDKIARQAR KERIDPMEIA QYYTRSYYED MDRLGIDRPN
IAPTATGHIP DQVNLISTLI EKGHAYEVNG NVYFSVESFK EYGKLSGRTT EEARQSGGRV
ETRSEKRHPA DFALWKKAEP GHLMKWDSPW GSGYPGWHAE CSAMAMKYLG ETIDIHGGGM
ENKFPHHECE IAQSEAATGK PYVRYWMHNN MVTVNGTKMG KSLGNFINLK DIFKRFAPVV
IRFFILQSHY RSPLDFSETA IDASRTGLEK LQDTWTRLQQ AAPGSGEIET RPFQERLTEA
MNDDFNTPIA IAVLFDLAKA VNTAIAAPSG LNQDSLDRCI SLFRSFGEEV LGILQNPATE
KGKTNNEDEE TLDTVMNLLI DIRSRARSGK DYELSDLIRD KLAEAGITMK DTREGTEWSR
S