Gene Paes_2011 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPaes_2011 
Symbol 
ID6459826 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProsthecochloris aestuarii DSM 271 
KingdomBacteria 
Replicon accessionNC_011059 
Strand
Start bp2208170 
End bp2208727 
Gene Length558 bp 
Protein Length185 aa 
Translation table11 
GC content52% 
IMG OID642725994 
Producthypothetical protein 
Protein accessionYP_002016668 
Protein GI194334808 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.515904 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.333108 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGGGTA AGAAAATTAT ATCGCGACTC GGTCGCTCGA TGAGTCTTCG CAGTTTTCAG 
GCAGGTCTGC TGATTTATGA TGGTACCCTG ATCTTCTGTG ATCGTTTTCT GCATACAAGG
CCTTCTGTCT GCAGCCACAT GACCCGTCAT GCCTTCAGTG CTGTGTGCTC TCTTTCCGAG
AGCGTTTTGA TGTCAGGCAG TGACCGCCGC AGCAGACAAC AGCTTGTTCA CGTGGCTTCT
GAACGGTTTC AGTCCCTCCA GAACCATTAC GAGGCGTTTC TTGAAGAGAA GCAGTTTCCT
CAATGGGGGG GCGATGAACA CGAGGCTCTC GTCGTCTGTA AACGCTTTTA CGGCGTTGCC
GACCGGATTG ACCGGTCTGA TTTTTTTGCA TTTTCGGAGC TGTCGGCAGC TACATTTGCC
AATACCGAGA TCTGCCTTAT TCGAAAAGCG GTATGGCTGC TTACGCAGCA ATCCTCTGTA
GATCCCTCTC CCGAGAGACA GAGCATACAG GGCGCTCAAA GAAAACCCGC TACTCGTTTC
GATGCCATGC TGTGCTGA
 
Protein sequence
MPGKKIISRL GRSMSLRSFQ AGLLIYDGTL IFCDRFLHTR PSVCSHMTRH AFSAVCSLSE 
SVLMSGSDRR SRQQLVHVAS ERFQSLQNHY EAFLEEKQFP QWGGDEHEAL VVCKRFYGVA
DRIDRSDFFA FSELSAATFA NTEICLIRKA VWLLTQQSSV DPSPERQSIQ GAQRKPATRF
DAMLC