Gene Paes_2009 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPaes_2009 
Symbol 
ID6459832 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProsthecochloris aestuarii DSM 271 
KingdomBacteria 
Replicon accessionNC_011059 
Strand
Start bp2206661 
End bp2207086 
Gene Length426 bp 
Protein Length141 aa 
Translation table11 
GC content51% 
IMG OID642725992 
Productnucleoside diphosphate kinase 
Protein accessionYP_002016666 
Protein GI194334806 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0105] Nucleoside diphosphate kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000148983 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.309195 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAAGGA CGCTTACCAT TCTCAAACCG GACTGTGTTC GTAAACAGCT CATCGGAGCA 
GTCATCGATA AAATCGAACG AGCAGGCTTC CGTGTTGTTG CCATGAAAAA GACAAAACTC
ACTGCCCAGA CAGCCGGAGA GTTCTATGCT GTTCACAGCC AACGCCCGTT TTATGGCGAA
CTCGTCGAAT TCATGTCTTC GGGTCCCTGC GTACCGATGA TTCTTGAAAA AGAGAACGCT
GTTGCCGATT TCCGCACCCT GATCGGAGCG ACTGACCCTG CTGAAGCAGC TGAAGGCACC
ATCCGCAACC TCTTTGCCGA CAGCAAGGGC GAGAATATCA TTCACGGCTC GGACTCAGCT
GAAAATGCAC AGATCGAAGC CGGGTTTTTC TTTTCAACAG AAGAGGCTGT GCGCGTCAAT
AACTGA
 
Protein sequence
MERTLTILKP DCVRKQLIGA VIDKIERAGF RVVAMKKTKL TAQTAGEFYA VHSQRPFYGE 
LVEFMSSGPC VPMILEKENA VADFRTLIGA TDPAEAAEGT IRNLFADSKG ENIIHGSDSA
ENAQIEAGFF FSTEEAVRVN N