Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Paes_1998 |
Symbol | |
ID | 6460777 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prosthecochloris aestuarii DSM 271 |
Kingdom | Bacteria |
Replicon accession | NC_011059 |
Strand | - |
Start bp | 2195799 |
End bp | 2196800 |
Gene Length | 1002 bp |
Protein Length | 333 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 642725982 |
Product | bacteriochlorophyll c synthase |
Protein accession | YP_002016656 |
Protein GI | 194334796 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0382] 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases |
TIGRFAM ID | [TIGR01476] bacteriochlorophyll/chlorophyll synthetase |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.451912 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGACGG CAACTCACCG ACTTGGATTT ACCGATAAAC TCAGGGCGCA TCTCGAATTA CTCGATCCTG TAACCTGGAT CAGCGTGTTT CCCTGCCTTG CCGGCGGCGT CATGGCTTCC GGGGCAATGC AGGGAACCTT TCATGACTAT CTTCTTCTTT TGGCTCTTTT TCTCATGTTC GGACCGCTCG GGACCGGATT CAGCCAGACA ATCAATGATT ATTTCGATCT CGAACTCGAC AGGGTCAACG AGCCGACCCG TCCTATTCCT TCAGGCCGCC TTTCAGAAAA AGAGGCACTG ATCAACAGTA TCGTTGTTTT TGTGCTTGCG CTTGGAATCG GTATCGTTCT GGGGATTCAT GTCGGCGGGA CAAGGGGGAT ATTCATTACT TCAGCAATTG CTGTCGGCCT TTTTGTTGCC TATATCTATT CCGCCCCTCC GCTGAAGCTC AAAAAGAATA TTCTTACCTC CGCACCTGCA GTCGGGCTTT CCTACAGTCT GATCACCTTT CTGTCGGCCA ACGCACTCTT CAGCGATATC CGCCCTGAAG CTGTCTGGCT TGCTGTGCTG AACTTCTTTA TGGCTATTGC CCTCATTATC ATGAACGACT TCAAGTCTGC CAAAGGCGAT GAGGAGAGCG GCTTGAAATC TCTGACGGTC ATGATCGGAG CAAAAAACAC CTTTCTTGTC GCATTTGCCA TCATCGATAT GGTGTTCGCC GTTTTTGCCT GGCTGACCTT TAGCTGGGGT TTCACGATTC TTATGTATGT TATTCTCGTC TCACTCGTGG CAAATATCAC TATTCAGATT ATGCTCTATC GCGATCCGAA GGGCGGCCTC TCATTCATGC AGCATGCGGT TGATGATGGT TTCGGCAACG CGATCGGCAA GAGCGATGTA CAGGAGCACA ATTCCTTTCT TCGTTACCAG GTGGCCAATA ATCTGCTTTT TCTGATCAAT CTTCTTGTTG CGGCGGGAAT GGTCGGTGCC AGGTATATGT AA
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Protein sequence | MMTATHRLGF TDKLRAHLEL LDPVTWISVF PCLAGGVMAS GAMQGTFHDY LLLLALFLMF GPLGTGFSQT INDYFDLELD RVNEPTRPIP SGRLSEKEAL INSIVVFVLA LGIGIVLGIH VGGTRGIFIT SAIAVGLFVA YIYSAPPLKL KKNILTSAPA VGLSYSLITF LSANALFSDI RPEAVWLAVL NFFMAIALII MNDFKSAKGD EESGLKSLTV MIGAKNTFLV AFAIIDMVFA VFAWLTFSWG FTILMYVILV SLVANITIQI MLYRDPKGGL SFMQHAVDDG FGNAIGKSDV QEHNSFLRYQ VANNLLFLIN LLVAAGMVGA RYM
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