Gene Paes_1986 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPaes_1986 
Symbol 
ID6459890 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProsthecochloris aestuarii DSM 271 
KingdomBacteria 
Replicon accessionNC_011059 
Strand
Start bp2180875 
End bp2181984 
Gene Length1110 bp 
Protein Length369 aa 
Translation table11 
GC content45% 
IMG OID642725971 
ProductCRISPR-associated RAMP protein, Cmr1 family 
Protein accessionYP_002016645 
Protein GI194334785 
COG category 
COG ID 
TIGRFAM ID[TIGR01894] CRISPR-associated RAMP protein, Cmr1 family 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGAATT CTTTACAAAA AGTCCCACCG ATAACCCTCA GCACCCTGAC ACCACTCTGG 
ACAGGAGGTC CACAAGCAGG AGTTGTGGAC CGTATTCATG AAACCGGAAT GATCGGAAGT
CTTCGGTGGT GGTTTGAAGT ACTGGTCAGA GGTGTTGGCG GAAAAGTTTT GTCCCCGAAT
GGAGAAAAGT GTGCAATTCT TGATCTGGAG AAATATAAAA AGCTCACTAC CCAACAAAAA
AACGATCCAG AAAAGCTCAA AGAATGCGGA TTATGTGATG CCTCACTGAT ATTCGGTGCA
ACCAACTGGA AACGAAAATT TCGGTTAGAA ATCGAGGATC ACACGAGCGA TATCCATCTA
GGAAATATCA GCGTTAACAC AGGTTCCAAC AAACCAGCGA AATGGTTTTT TAATAACCAT
GCCCGTAAAG GTAATCTCAC TCTGAAAATC ATTTCTCTGA CCAGGGACAG GAAGCTGTTT
GATCCTGCAA TTATCGCAGG GCTAGTGCAG TTCGTCAGTG ACTGGGGTGG ACTGGGAGCA
CGAAACCAGA TGGGATTCGG AATTGTCAGA CCAGAGCAAG CGCTTGATGC CCGCCCTCTT
TATGAGCATC TCGCCAGGAT TCGGAAGCAA GCGACAAATC AACAGCTCCC CTCGCTTGAC
AACATGTTTT TTGTGCAACT AAAACCACAG GATCAAAGCC GGTTTGACCC AGAAGCATCA
TTTACATTAA AACATGAGCT TCGAAAAAAA ATACAGGAGG AAGAAAAAAG AACAGCTGAA
TTGCAAAGCA AAAAGCCTGA TGATACTCTT TCCCATTTCA TCATGGGCAC AATAAAGCCC
GAAAAATTAG CCTCTAAAAT TTTCATATCG AGGCCCTTCG ATAAAGATGA GACAAGCACT
ATCCGTCTCT GGGGATGGTT ACCGAAACAA TCCAGTCGTT ACGATTCGTC ATGGAATCGG
CAAAGCATCC GGCAGCTTAT CTATCAACAT ATTGAGCAAA ACTATCACAT AGAACCGGAT
GACTGGGTTG AACTCAATCA CCCTGATCCC AAACTGAAAA ACAGCGAAGA CAAGTTTCTG
AAAACATTAC TGCGCATCGA TGAGGGATAG
 
Protein sequence
MPNSLQKVPP ITLSTLTPLW TGGPQAGVVD RIHETGMIGS LRWWFEVLVR GVGGKVLSPN 
GEKCAILDLE KYKKLTTQQK NDPEKLKECG LCDASLIFGA TNWKRKFRLE IEDHTSDIHL
GNISVNTGSN KPAKWFFNNH ARKGNLTLKI ISLTRDRKLF DPAIIAGLVQ FVSDWGGLGA
RNQMGFGIVR PEQALDARPL YEHLARIRKQ ATNQQLPSLD NMFFVQLKPQ DQSRFDPEAS
FTLKHELRKK IQEEEKRTAE LQSKKPDDTL SHFIMGTIKP EKLASKIFIS RPFDKDETST
IRLWGWLPKQ SSRYDSSWNR QSIRQLIYQH IEQNYHIEPD DWVELNHPDP KLKNSEDKFL
KTLLRIDEG