Gene Paes_1983 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPaes_1983 
Symbol 
ID6459899 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProsthecochloris aestuarii DSM 271 
KingdomBacteria 
Replicon accessionNC_011059 
Strand
Start bp2176063 
End bp2177061 
Gene Length999 bp 
Protein Length332 aa 
Translation table11 
GC content53% 
IMG OID642725968 
Productconserved hypothetical cytosolic protein 
Protein accessionYP_002016642 
Protein GI194334782 
COG category 
COG ID 
TIGRFAM ID[TIGR01877] CRISPR-associated endoribonuclease Cas6 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.00299228 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTATTCAT CCTTCACCTC CCTCTCCATA GCCAGGTTCC GGTTCACTAT TGAACCGACG 
GAAGAAATCA GTCTCCCCGA ATACAAAGGT TCTGCATTTC GGGGCGGGTT CGGGCATGCG
TTCAAGCGGG CGACCTGTAT CACCCGCGAC CGGTATTGCG AGCCGTGTAT TCTGAAATTT
TCCTGTACCT ATTTCAAGGT GTTTGAGTCG AAGGTATCGC GCGAGACGGC TGAACGGTTG
CGCCTTGGAG GCGACGCGCC TCATCCGTTC ATTATTGAGC CGCCGCTTAC CCGTCAGGGA
TATTTTCAGC CGGGTGACAG GCTTTCCTTT TCTCTTGTAT TGATCGGTAC AGCTATAGGG
CAGTTGCCGT TTTTTGTCTA TGCGTTCATG ATTCTTGGTG AGAGTTTTGG TATTGGTAAA
GGGCGAGGGC GGTTTCGTTT GGTGTCGGTT GAAGACGAGA ACGGGAAACA GTTATACGAC
AACGGAAATC TTGCTGGTGG TTTTGTTATC CGTTCGGCTG ATGAGATTAT GAAAACAGAT
GTTTCCTCCG ATGATGACCG CATGAAGCTG CGCTTCGAGA CGCCCCTGCG GATGAAGACG
GCGTTTGGCC GGGATCGCAA AGCACTGGTT ACCGGTATGC ATGAGCCTGC GGATTTCAGG
GTGCTCTTGA AATCGTTGTA CCATCGTGCG TTTGTGTTGG GTCAGTTGTA TGGGGAGGGT
GTCGATGAAG CGGAGTATGA TAGCCGAAAC CTGCCGTTGG TTGATGGCAC TGTTGCGGTG
GAAAATGCCG ATATCTTCTG GTACGACTGG GAGCGGTTTT CCCAGCGCCA GGAGCGCAGA
ATGAAGCTTG GCGGGGTGAT GGGTGAAGTG ACGTTCAGCG GAAAGGTTGC AGAGTACCTC
CCGCTGTTTC GGCTGGGTGA ATATTTGCAT ATCGGCAAGG GAACAGGGTT CGGTCTTGGA
AAGTACCGGA TTGCCAAGGA AAGCGGGAAG ACGCCATGA
 
Protein sequence
MYSSFTSLSI ARFRFTIEPT EEISLPEYKG SAFRGGFGHA FKRATCITRD RYCEPCILKF 
SCTYFKVFES KVSRETAERL RLGGDAPHPF IIEPPLTRQG YFQPGDRLSF SLVLIGTAIG
QLPFFVYAFM ILGESFGIGK GRGRFRLVSV EDENGKQLYD NGNLAGGFVI RSADEIMKTD
VSSDDDRMKL RFETPLRMKT AFGRDRKALV TGMHEPADFR VLLKSLYHRA FVLGQLYGEG
VDEAEYDSRN LPLVDGTVAV ENADIFWYDW ERFSQRQERR MKLGGVMGEV TFSGKVAEYL
PLFRLGEYLH IGKGTGFGLG KYRIAKESGK TP