Gene Paes_1977 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPaes_1977 
Symbol 
ID6459911 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProsthecochloris aestuarii DSM 271 
KingdomBacteria 
Replicon accessionNC_011059 
Strand
Start bp2169423 
End bp2169842 
Gene Length420 bp 
Protein Length139 aa 
Translation table11 
GC content44% 
IMG OID642725962 
Productheat shock protein Hsp20 
Protein accessionYP_002016636 
Protein GI194334776 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0071] Molecular chaperone (small heat shock protein) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.334288 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.643075 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTATCA AGTTGTATGG TCGGGATCCT CTCAAGATGT TCGAGAATGT GTTTAACGAC 
ACGGTGTCTC CCTTTGTTTC ATCCATGGTT GCTCATTCGT TCAAGGTTGA TGTCAGTGAG
GATGAAATGG CTATCTACAT CGATGCCGAC ATGCCGGGAA TGAAGAAAGA GGATGTGAAA
ATCAGCATGG ATGACGATGT TATGACGATT TGTGCCGAAA GGACACATGA GGAAGAGGAG
AAAAAGAAAG ATTATCATCG CATTGAGCGT ACCTACGGCA GTATGAGCAG GAGTTTCAGT
GTGGGGGATA ATGTGGATGT TGATAAGATT GAGGCATCGT ATGACAACGG GGTGTTGCAC
ATTGTTGTGC CGAAAAAAGA GCCTGTAGAA AAGAAGAGCA AGGATATATC GATCAAGTGA
 
Protein sequence
MAIKLYGRDP LKMFENVFND TVSPFVSSMV AHSFKVDVSE DEMAIYIDAD MPGMKKEDVK 
ISMDDDVMTI CAERTHEEEE KKKDYHRIER TYGSMSRSFS VGDNVDVDKI EASYDNGVLH
IVVPKKEPVE KKSKDISIK