Gene Paes_1976 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPaes_1976 
Symbol 
ID6459912 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProsthecochloris aestuarii DSM 271 
KingdomBacteria 
Replicon accessionNC_011059 
Strand
Start bp2167706 
End bp2169346 
Gene Length1641 bp 
Protein Length546 aa 
Translation table11 
GC content51% 
IMG OID642725961 
Productmagnesium-protoporphyrin IX monomethyl ester anaerobic oxidative cyclase 
Protein accessionYP_002016635 
Protein GI194334775 
COG category[C] Energy production and conversion 
COG ID[COG1032] Fe-S oxidoreductase 
TIGRFAM ID[TIGR02026] magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative cyclase 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.175578 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.725626 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAATTC TGATGCTTCA GCCAAATTAT CACTCTGGAG GAGCTGAAAT TGCCGGAAAC 
TGGACCCCAA GCTGGGTGGC CTATATCGGC GGTGCTCTTA AAAAGGTGGG CTTTACACAG
ATAAGGTTTG TTGATGCCAT GGCAGACGAT CTCCCTGATG AAACCATCGA GGAAATCATC
CGTACAAATG AGCCGGACGT GGTCCTGACC ACCAATATCA CTCCCTCGAT TTTCAAAGCT
CAGGATATCA TGAAGCTTGC CAAGAAAGTC AACCCCAAGA TCAGAACGAT CATGGGCGGC
ATTCACTCGA CCTTCATGTA CCCGCAGGTG CTCTCCGAAG CCCCTGAAAC AGATTACGTG
ATCCGTGGCG AAGGCGAAGA GATCGCCGTC AATCTCATCA AGGCAATCGC TGCGGGAACC
GACCTGCAGG ACCGTGAAAA CATCACCGGT ATCGCCTATA TCAATGAAGA GGGCAAGGTG
CATGCCACTC CCGCTCACCC TGTCATTGAA GACCTTGACG ATCTGACTCC GGACTGGAGC
CTGTACGATT GGGATAAATA TATCTACACG CCTCTCAACT GCCGTCTCGC CGTACCGAAC
TTCGCAAGAG GCTGCCCCTT CACCTGTACA TTCTGCTCGC AGTGGCAGTT CTGGCGCCGT
TACCGCGCAC GCAGCCCGAA ACATTTTGTC GATGAGATCG AGATTCTGGT CAAGAAATAC
GATGTAGGAT TCTTCATTCT TGCCGACGAA GAGCCGACAA TCAACAAGCA GAAATTCGTT
TCACTCTGTC AGGAACTCAT CGATCGCGAC CTTGGCGTCA CCTGGGGTAT CAATACCAGG
GTAACCGACA TCATGCGAGA CGAAGACCTT TTGCCGTTCT ACCGCAAAGC CGGTCTTGTT
CACGTCTCTC TCGGCACCGA AGCAGCAAGC CAGATGAACC TCAACCGTTT CCGTAAAGAG
ACGACCATCG AGGAAAACAA GTACGCCATC AAACTGCTTC AGAAAAACGG TATTGTCGCC
GAAGCACAGT TTGTGATGGG TCTGGAACAT GAGACGCCTC AAACCATCGA AGAGACCTAT
CAGCTCTGTA AGGACTGGGA TCCTGACATG GCCAACTGGA CCATCTACAC TCCATGGCCT
TTCTCCGACC TTTTCAAGGA GCTCGGCGAC AGGGTTGAAG TCCGTGACTA CTCACGCTAC
AACTTCGTTT CTCCGATCAT CAAACCGGAT AACATGGAGC GTGAAGATGT GCTGAAAGGT
GTTCTGAAAT CATACGGACG CTTTTACGCA CGAAAAACAT TCTTCAGCTA CCCGTGGATC
AAAGATCCCT ATGTTCGCAA GTACATGCTC GGCTGCCTGA AAGCGTTTGC TCAAACAACG
CTCACCAAGA GATTCTACGA CATCGACCGC GTATCGACCA AGAACAGAAA GATCGAGATC
GACCTCGGCT TCGACAAGTC CAGAATCCTG ACACAGGCAG AAGTCAAGAA CCTGAAGGAA
CTGAGACCTG AAATGGTTGC AGACATGAGC TTCGGCCTGA AAGAAGCAGG CTATCAGCGT
GAGCATGACG AACATGACTG GGGCGAATTT GATGAATCGA CCATCAAAGA TCGCAACTCA
TCAACCGTAC GCAACTGCTG A
 
Protein sequence
MKILMLQPNY HSGGAEIAGN WTPSWVAYIG GALKKVGFTQ IRFVDAMADD LPDETIEEII 
RTNEPDVVLT TNITPSIFKA QDIMKLAKKV NPKIRTIMGG IHSTFMYPQV LSEAPETDYV
IRGEGEEIAV NLIKAIAAGT DLQDRENITG IAYINEEGKV HATPAHPVIE DLDDLTPDWS
LYDWDKYIYT PLNCRLAVPN FARGCPFTCT FCSQWQFWRR YRARSPKHFV DEIEILVKKY
DVGFFILADE EPTINKQKFV SLCQELIDRD LGVTWGINTR VTDIMRDEDL LPFYRKAGLV
HVSLGTEAAS QMNLNRFRKE TTIEENKYAI KLLQKNGIVA EAQFVMGLEH ETPQTIEETY
QLCKDWDPDM ANWTIYTPWP FSDLFKELGD RVEVRDYSRY NFVSPIIKPD NMEREDVLKG
VLKSYGRFYA RKTFFSYPWI KDPYVRKYML GCLKAFAQTT LTKRFYDIDR VSTKNRKIEI
DLGFDKSRIL TQAEVKNLKE LRPEMVADMS FGLKEAGYQR EHDEHDWGEF DESTIKDRNS
STVRNC