| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Paes_1965 |
|---|
| Symbol | |
|---|
| ID | 6459938 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prosthecochloris aestuarii DSM 271 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011059 |
|---|
| Strand | + |
|---|
| Start bp | 2146748 |
|---|
| End bp | 2147797 |
|---|
| Gene Length | 1050 bp |
|---|
| Protein Length | 349 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 642725950 |
|---|
| Product | DNA polymerase III, delta subunit |
|---|
| Protein accession | YP_002016624 |
|---|
| Protein GI | 194334764 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG1466] DNA polymerase III, delta subunit |
|---|
| TIGRFAM ID | [TIGR01128] DNA polymerase III, delta subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.025089 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAACAAC TGCGGAAAAA CATCTCCTCG GGAAAGCTCC AACCGCTCTA CTTTCTTTAC
GGCCCGGAAA GCTATCTGAA AGAAGAGCTT ACCGAGCTGA TCAAAACAAG AGCTTTTTCC
TCTGAAGAAG AGGCCACGCT CAACACCTCG GTTTTCTACG GCCAGGACGT CACGCTTGGC
GACCTTGTAT CAAGAGCATC AGAGTTTCCG ATGTTTACCG AACGCAAACT CATTGTCGTC
AAACACTTTG AAAAATATCG AAAAGCAGGA TCGGTCGCCC AGCAGAAACA GCATGTCGAG
CAATTCAGGC GCTACTGCAA GAACCCTGCC GATACAACCA TCCTGGTGCT GGATGCCGAT
CAAATCGACA AAAAAGATCT CCAGAAAGCC CCATTCAGCG AACTGGCCCC ATTGCGTCAT
GATTTCGCAC AGATCAAGCA TGCTGATGTT TTTGCAACAG AACGGGCAGC AACCTACGGA
TGGGAATTTG AGCCGGATGC GATAAAGGCA TTCAGTGCCT ATATCGAACC ATCGTCACGC
GAAATCTGCA GAGAAGTTGA AAAGCTTGTG ATGTACGCCT CGTCAAAACG AAAGACAAGC
CGGATCACCT CAGACGATGT CTACGAATGC GTCGGTATTT CGAAGCAGTA CAATGTTTTT
GAACTCGAAA AAGCGCTTGC ATCGAAAAAC CTCAGACTCT GCAGCGGAAT CTCGCTGATG
ATTATGGAAC AGGAAGGTCA GAAAGAGGGG ATTATGAACA TTCTTCGCTA TCTGAGCGTG
TTCTACAGCC GGATATGGAA AATGCAAGCC CCCGGCATTC GCCAGCAGCC ACTATCGGAA
ACCGCAAAAA TACTGGGCAT GTTCGGCAGA CAGGAATTTT TCGCAAAAAA TTATCTCGAC
TATGCCACGC GTTTTTCTCT TCAGGAGATT GAAAAAGCAA TCCTCGCGCT CCAGCATACC
GACGCAGCCC TCAAAGGCCT GCATCCCTAC CCCGACGAAA AATACCTGAT CCTGAGCCTG
ATGCAGCAGT TGCTGGGAGA AAGCCGGTGA
|
|---|
| Protein sequence | MKQLRKNISS GKLQPLYFLY GPESYLKEEL TELIKTRAFS SEEEATLNTS VFYGQDVTLG
DLVSRASEFP MFTERKLIVV KHFEKYRKAG SVAQQKQHVE QFRRYCKNPA DTTILVLDAD
QIDKKDLQKA PFSELAPLRH DFAQIKHADV FATERAATYG WEFEPDAIKA FSAYIEPSSR
EICREVEKLV MYASSKRKTS RITSDDVYEC VGISKQYNVF ELEKALASKN LRLCSGISLM
IMEQEGQKEG IMNILRYLSV FYSRIWKMQA PGIRQQPLSE TAKILGMFGR QEFFAKNYLD
YATRFSLQEI EKAILALQHT DAALKGLHPY PDEKYLILSL MQQLLGESR
|
|---|
| |