Gene Paes_1964 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPaes_1964 
Symbol 
ID6459939 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProsthecochloris aestuarii DSM 271 
KingdomBacteria 
Replicon accessionNC_011059 
Strand
Start bp2146178 
End bp2146678 
Gene Length501 bp 
Protein Length166 aa 
Translation table11 
GC content57% 
IMG OID642725949 
Productsingle-strand binding protein 
Protein accessionYP_002016623 
Protein GI194334763 
COG category[L] Replication, recombination and repair 
COG ID[COG0629] Single-stranded DNA-binding protein 
TIGRFAM ID[TIGR00621] single stranded DNA-binding protein (ssb) 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.0586806 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCACGCG GACTCAATAA AGTAATGCTT ATCGGACACC TCGGAAGCGA CCCCGAACTC 
AGGGTCATCC CGTCAGGACA GTCAGTTGCC AATTTCACGC TGGCAACCAA CGAAAGTTAC
AAAGACAGCT CCGGCAACCT TCAGGAACGG ACCGAATGGC ACCGAATTGT CGCCTGGGGA
AGACTTGCCG AAATCTGCCA GCAGTACCTT AAGAAAGGCC GTCAGGTCTA TATCGAAGGA
AAACTCCAGA CCCGCAGCTG GGACGACACC AAAACCGGAG ACAAACGCTA TGCAACGGAA
ATCGTCTGCA GCGACATGCA GATGCTCGGC TCAGCCCGCG AAGGAGGTGT TCCCCAGGGG
GGAGGCAACA ACGCCCAGTA TAGCCAGAGC GGCGGTGGAT ACAGCACCCC CTCTTCCCAG
CCCCAACAGG GCGGTTATCA GGGTTCTGCC GCTTCAGGCT CCCAGGCACC GGAACCCGAC
AAGGACGATC TGCCATTCTA A
 
Protein sequence
MARGLNKVML IGHLGSDPEL RVIPSGQSVA NFTLATNESY KDSSGNLQER TEWHRIVAWG 
RLAEICQQYL KKGRQVYIEG KLQTRSWDDT KTGDKRYATE IVCSDMQMLG SAREGGVPQG
GGNNAQYSQS GGGYSTPSSQ PQQGGYQGSA ASGSQAPEPD KDDLPF