Gene Paes_1960 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPaes_1960 
Symbol 
ID6459947 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProsthecochloris aestuarii DSM 271 
KingdomBacteria 
Replicon accessionNC_011059 
Strand
Start bp2142880 
End bp2143125 
Gene Length246 bp 
Protein Length81 aa 
Translation table11 
GC content48% 
IMG OID642725945 
Productbacteriochlorophyll C binding protein 
Protein accessionYP_002016619 
Protein GI194334759 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000000021808 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGGAG GTGGCGTATT TACCGATATC CTAGCAGCTG CAGGCCGTAT TTTCGAAGTT 
ATGGTTGAAG GTCACTGGGA AACTGTCGGA ATGCTTTTTG ATTCACTTGG CAAAGGCACA
ATGAGAATCA ATCGCAATGC TTATGGCAAT CTTGGTGGCG GCGGCGGCAG CCTTCGCGGT
TCTTCACCTG AGGTTTCCGG ATTTGCTGTA CCAACAAAAG CTGTTGAGTC CAAATTCGCA
AAGTAA
 
Protein sequence
MSGGGVFTDI LAAAGRIFEV MVEGHWETVG MLFDSLGKGT MRINRNAYGN LGGGGGSLRG 
SSPEVSGFAV PTKAVESKFA K