Gene Paes_1953 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPaes_1953 
Symbol 
ID6459976 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProsthecochloris aestuarii DSM 271 
KingdomBacteria 
Replicon accessionNC_011059 
Strand
Start bp2134736 
End bp2136013 
Gene Length1278 bp 
Protein Length425 aa 
Translation table11 
GC content50% 
IMG OID642725938 
Productpeptidase M16 domain protein 
Protein accessionYP_002016612 
Protein GI194334752 
COG category[R] General function prediction only 
COG ID[COG0612] Predicted Zn-dependent peptidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.531871 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACAACA GGGATATCAT CCATGATGAC ATAGCATCAG GGACTTTCCA TAACGATACG 
ATGCAAAACG GCATCAGAGT TATCACCAAC AGAGTATCCC ATGTACAAAG CGTTACACTC
GGAATCTGGA TCAACGCCGG CTCACGCGAA GACCCGGATA CCACACCCGG ACTGGCACAT
TTTGTTGAAC ATGCCATCTT TAAAGGAACC TCCTCAAGGG ATTATGAGAC CATAGCCCGC
TGCATCGAAG ATGTAGGCGG CTATATCGAT GCGTGGACCA CCAAGGAAAA CACCTGTATC
TACATCCGCT GCCTCAAAGA ACACATTGCG CTCGCATTCA GCCTCCTGTC CGACCTCTGC
TGCAATCCTT CATTTCCGGA TGAAGAGATC GAAAAAGAAA AAGAGGTCGT CATCGAAGAG
ATTCACAGCA TCAACGATGC TCCCGAAGAA CTGATCTTCG ATGAATTTGA CCTTCATGCC
TTTCCCCGTC ATCGGCTCGG CTCGACTATA CTCGGGACCG AAGAGTCGAT CGAATCCATC
ACAGGCGATG ACTTGCGACA GTTCATGCAA AACAATTACA CCCCGGACAA CCTTCTTGTC
ACAGCAGTGG GCAACGTCAC TCACACCGAG ATCATGGAGC TTGCTGTTCG AAGCTTTGCA
TCGCTTCAGG AAGGCACCCC CGCAAAACGA TCGACAAGAG AGTTCGAACT CAGGGATTAT
ACCCCATTCA ATCTGCAGCT CCAGAAACCG GTCTACCAGG CCCAGCTTCT TTTCGGCACG
GCCGCCACAA GGAAAAACGA ACATTTTTAC AGCCTTCTGC TCCTCAATAC AATCCTTGGC
AGCGGCATGA GTTCACGCAT GAACCTTGAA CTCAGGGAAA AAAACGCACT CGCGTATAAC
GTCTACAGCT CTCTGACGCT CTTTGATGAT GCGACAATGT TCAATGTCTA CGCAGGGACC
GACAACAGCA ATATTGTCAA AGCTCTTGCC ATCATTGATC AGATACTCTC CCCCGAATCA
CTGTGCAGCA TAGATCAGAG TGAACTCGAA ACCGCCAAAT CAAGGCTGCT CGGAGCGATG
ATCATGGGTA TGGAAAAAAT GACGAGAAGA ATGTCGCGTG CAGCGCGAGA CCTCTTCTAC
TTCGGAAGAA TCATCCCGCT GGAAGAAAAA ATCAACGCTA TCAGACAGGT AACACAGAAC
GACATTCGCC ATGCCGTCAT GCACCTCCTC CAAAGCGCCC CGGCCTCAAC GCTCATCTAT
GAAGCAGAAG AGGAGTGA
 
Protein sequence
MNNRDIIHDD IASGTFHNDT MQNGIRVITN RVSHVQSVTL GIWINAGSRE DPDTTPGLAH 
FVEHAIFKGT SSRDYETIAR CIEDVGGYID AWTTKENTCI YIRCLKEHIA LAFSLLSDLC
CNPSFPDEEI EKEKEVVIEE IHSINDAPEE LIFDEFDLHA FPRHRLGSTI LGTEESIESI
TGDDLRQFMQ NNYTPDNLLV TAVGNVTHTE IMELAVRSFA SLQEGTPAKR STREFELRDY
TPFNLQLQKP VYQAQLLFGT AATRKNEHFY SLLLLNTILG SGMSSRMNLE LREKNALAYN
VYSSLTLFDD ATMFNVYAGT DNSNIVKALA IIDQILSPES LCSIDQSELE TAKSRLLGAM
IMGMEKMTRR MSRAARDLFY FGRIIPLEEK INAIRQVTQN DIRHAVMHLL QSAPASTLIY
EAEEE