Gene Paes_1951 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPaes_1951 
SymbolrecA 
ID6459978 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProsthecochloris aestuarii DSM 271 
KingdomBacteria 
Replicon accessionNC_011059 
Strand
Start bp2132514 
End bp2133563 
Gene Length1050 bp 
Protein Length349 aa 
Translation table11 
GC content51% 
IMG OID642725936 
Productrecombinase A 
Protein accessionYP_002016610 
Protein GI194334750 
COG category[L] Replication, recombination and repair 
COG ID[COG0468] RecA/RadA recombinase 
TIGRFAM ID[TIGR02012] protein RecA 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.971416 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATACAC AGAAAACAGC AGTGAATAAT AAAGAGATGG ATCCGGCGAA GCTCAAACAG 
CTGAACCTGG CAATGGAAAC CCTTGAAAAG CAGTTCGGTA AAGGGGTGAT TATGCGGCTC
GGTGATGCTG CGGTTATGCC TGTTCAGGTG ATTTCAACAG GTTCTATTGC CCTCGATTTC
GCTCTTGGTG TCGGCGGCTT TCCTAAAGGG AGGGTTGTCG AGATCTACGG TCCGGAGTCT
TCGGGTAAAA CAACGCTCGC TCTTCATGCT ATCGCTGAAG CTCAGAAGCT CGGTGGAGTG
GCGGCAATGG TCGATGCCGA ACACGCATTT GATCAGGCTT ATGCGAGAAA GCTTGGTGTT
GATATCAATG CTCTTCTTGT CAGTCAGCCG GAATCCGGAG AGCAGGCGCT TTCAATTGTC
GAGACGCTTG TCCGCAGCGG GGCCGTCGAT ATTGTTGTGG TTGATTCCGT TGCGGCACTG
GTGCCGCAGG CAGAACTTGA AGGGGAGATG GGAGACAGTG TCATGGGATT ACAGGCTCGT
CTGATGAGCC AGGCACTGCG TAAACTTACC GGTGCCATTT CAAAGTCCAG TTCTGTTGCG
GTGTTCATCA ACCAGCTTCG TGATAAAATC GGTGTGGTTT ATGGCAATCC GGAAACGACG
ACGGGCGGCA AAGCCCTGAA GTTCTACTCA TCGGTTCGCC TGGAAATCAG AAAAACCGCC
CAGATCAAGG ACGGTGTCGA TATTATCGGC AACAGGACAA AGGTCAAGGT TGTCAAGAAC
AAGGTCGCTC CTCCGTTCAA GACGGTTGAG TTCGATATTC TCTATGGTGA GGGGATTTCT
GTCATGGGAG AACTGATTGA TCTTGCTGTC GAGTTCGGGA TCGTCAAGAA AGCCGGGGCG
TGGTTCAGTT ATGAATCTGA AAAACTCGGT CAGGGGCGTG AGGCGGTAAA AAAAGCCTTC
AGGGAGGATC AGGAGCTTTA CAGCCGTATT CAGCAGCAGG TCAAAGAGGT GATGTCGCCT
GCGGTTCCTG TGGAAAAGAC GGATAGTTAA
 
Protein sequence
MNTQKTAVNN KEMDPAKLKQ LNLAMETLEK QFGKGVIMRL GDAAVMPVQV ISTGSIALDF 
ALGVGGFPKG RVVEIYGPES SGKTTLALHA IAEAQKLGGV AAMVDAEHAF DQAYARKLGV
DINALLVSQP ESGEQALSIV ETLVRSGAVD IVVVDSVAAL VPQAELEGEM GDSVMGLQAR
LMSQALRKLT GAISKSSSVA VFINQLRDKI GVVYGNPETT TGGKALKFYS SVRLEIRKTA
QIKDGVDIIG NRTKVKVVKN KVAPPFKTVE FDILYGEGIS VMGELIDLAV EFGIVKKAGA
WFSYESEKLG QGREAVKKAF REDQELYSRI QQQVKEVMSP AVPVEKTDS