| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Paes_1950 |
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| Symbol | |
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| ID | 6459982 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prosthecochloris aestuarii DSM 271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011059 |
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| Strand | - |
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| Start bp | 2131469 |
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| End bp | 2132512 |
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| Gene Length | 1044 bp |
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| Protein Length | 347 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 642725935 |
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| Product | TIM-barrel protein, nifR3 family |
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| Protein accession | YP_002016609 |
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| Protein GI | 194334749 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0042] tRNA-dihydrouridine synthase |
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| TIGRFAM ID | [TIGR00737] putative TIM-barrel protein, nifR3 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGGTCG GGTCATTGGA CATCGGTCAG GCGATTATGC TCGCGCCTAT GGAAGAGGTG
ACTGATCGTT CTTTCAGGAA AATCTGTAAG CGGTTCGGGG CAGATGTTGT CTATACTGAA
TTTATCAGTG CCGAAGCGAT CCGTCGACAG GTCGATACGT CGCTCCGTAA AATGCGGTTT
GACGATGATG AGGCTCCTGT TGTCGTTCAG ATTTTCGGCA ACAGCCAGGA AGCTATGGCT
GAGGCTGCTG TCATTGCGGC ATCGTGCAGC CCGGCATGGA TCGATATCAA TTTTGGTTGT
CCCGCAAAAA AAGTTGCCGG GAAAGGGGCC GGTGCTGCCC TGCTGAAAGA ACCCGATAAA
ATGGTCGCGA TTGCCGCTGC GGTTGTCCGT GCGGTCAATC TGCCTGTTAC GGTCAAAACG
CGTCTTGGCT GGGATCGCGA TTCAATCAAT ATTGTCGATA TCGTGCCCCG TCTGGAGGAT
GTCGGGGTTC AGGCTCTGGC GATTCACGGG CGGACGCGCA GCGAGATGTA CAGGGGCGTG
GCCGATTGGG AGTGGATCCG AAAGGTGACG GAGAAGGCCA GAATACCGGT TATCGCCAAT
GGCGATATAT GGAGTGCAGC GGATGCCAGG GCGATGTTTG CCGAGACCGG GGCTGATGCT
GTCATGATAG GACGAGGAGC GATTGGTAAT CCTTTTATCT TCGCTCAGGC CAGGGAGCTT
CTCGATACGG GGCGCGTGGT GACGCATCCT GATTACAGGG ATCGCATTGC CGTTGCGGTC
GAACATCTGA AACTGTCGGT TGAATTCAAG GGGGAGAAGT ACGGAAGCCT TGAAATGCGG
AGGCATTACT CAACCTATCT GAAAGGACTT CCGCGGGTTT CCAGGGTTCG CGACAAGCTG
GTTCGCGAAC CGGACTGGAG AAACGTCATC GAAATCCTTC AGGCTTACGA GGTCGAATGC
GAAGGCTATG AACGCGAAGG AAAGATCCGC GATTATGCGG AATTTCTCAA TGACCATTCG
AAGCGATTGA CATTAAACTA TTAG
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| Protein sequence | MKVGSLDIGQ AIMLAPMEEV TDRSFRKICK RFGADVVYTE FISAEAIRRQ VDTSLRKMRF
DDDEAPVVVQ IFGNSQEAMA EAAVIAASCS PAWIDINFGC PAKKVAGKGA GAALLKEPDK
MVAIAAAVVR AVNLPVTVKT RLGWDRDSIN IVDIVPRLED VGVQALAIHG RTRSEMYRGV
ADWEWIRKVT EKARIPVIAN GDIWSAADAR AMFAETGADA VMIGRGAIGN PFIFAQAREL
LDTGRVVTHP DYRDRIAVAV EHLKLSVEFK GEKYGSLEMR RHYSTYLKGL PRVSRVRDKL
VREPDWRNVI EILQAYEVEC EGYEREGKIR DYAEFLNDHS KRLTLNY
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