Gene Paes_1949 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPaes_1949 
Symbol 
ID6459983 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProsthecochloris aestuarii DSM 271 
KingdomBacteria 
Replicon accessionNC_011059 
Strand
Start bp2130430 
End bp2131449 
Gene Length1020 bp 
Protein Length339 aa 
Translation table11 
GC content52% 
IMG OID642725934 
Productaspartate-semialdehyde dehydrogenase 
Protein accessionYP_002016608 
Protein GI194334748 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0136] Aspartate-semialdehyde dehydrogenase 
TIGRFAM ID[TIGR01296] aspartate-semialdehyde dehydrogenase (peptidoglycan organisms) 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAGTA CACAGAAAGG ATACCGCGTT GCCATTCTGG GAGCGACCGG TCTTGTCGGC 
AGGACGATGC TGGACGTTCT TGAGGAAAGA AAATTTCCCG TCAGTGAGAT TGTGCCCCTT
GCTTCATCGA GGAGCAGAGG AAAGGAGATC GTGTTTGACG GCAGGACTTT TGTGACCCGG
GAACCCTCGA AAGAGGTGTT TGCAGAGGTC GATATCGCAC TGTTTTCAGC AGGGGCCGGT
GCCAGTCATG AGTGGGCCCG TATCGCTGCT GAAGCCGGAG CTGTGGTGAT TGATAATTCG
TCTGCGTTTC GTATGGACCC CGACGTACCG CTCGTGGTTC CTGAAGTGAA TCCTGAAGCT
ATTTTTGATG AGGACGGCAG ACCGGAGATG ATTATCGCCA ATCCTAACTG TTCAACCATT
CAGATGGTTG TCGTTCTCAA GCCGCTTCAT GACCGTTACA GGCTCAGGAG AGTTGTTGTA
TCGACCTATC AGTCGGTGAC GGGGAAGGGC AAGGCCGGTC GTGACGCTCT CGAAGCGGAG
TTGGCAGGCA CTGTCCCTGA ATCGTTCACT CATGTTCACC AGATCGCTTT TAACGCGATT
CCGCATATCG ATGTTTTTCA GGAGAACGGC TATACGAAGG AAGAACTGAA GATGGTCAAC
GAGACCAGAA AAATCATGGG AGACGACTCT CTTTCTGTCT CTCCCACGAC GGTCAGAATT
CCTGTTTACG GAGGGCATGG TGAATCGCTC AACATTGAGT TTGAAGAGGA TTTTTCAGTT
GACGATGTCC GGGAACTGCT CTCAAAGGCT CCTGGTGTGA TTGTGCAGGA TAATCCGTCG
GCCAATCTCT ATCCGATGCC CTTGTCGTCA TATGAGAAAG ACGAGGTGTT TGTCGGTCGC
ATCCGTCGTG ATTTATGGCA TCCGAAAACG CTCAACATGT GGGTTGTCGC CGATAATCTC
AGAAAAGGGG CTGCAACCAA TGCCGTCCAG ATCGCCGAAC AGCTTATCGG ACGGCTTTAA
 
Protein sequence
MSSTQKGYRV AILGATGLVG RTMLDVLEER KFPVSEIVPL ASSRSRGKEI VFDGRTFVTR 
EPSKEVFAEV DIALFSAGAG ASHEWARIAA EAGAVVIDNS SAFRMDPDVP LVVPEVNPEA
IFDEDGRPEM IIANPNCSTI QMVVVLKPLH DRYRLRRVVV STYQSVTGKG KAGRDALEAE
LAGTVPESFT HVHQIAFNAI PHIDVFQENG YTKEELKMVN ETRKIMGDDS LSVSPTTVRI
PVYGGHGESL NIEFEEDFSV DDVRELLSKA PGVIVQDNPS ANLYPMPLSS YEKDEVFVGR
IRRDLWHPKT LNMWVVADNL RKGAATNAVQ IAEQLIGRL