Gene Paes_1937 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPaes_1937 
Symbol 
ID6460017 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProsthecochloris aestuarii DSM 271 
KingdomBacteria 
Replicon accessionNC_011059 
Strand
Start bp2118465 
End bp2119199 
Gene Length735 bp 
Protein Length244 aa 
Translation table11 
GC content50% 
IMG OID642725922 
ProductABC transporter related 
Protein accessionYP_002016596 
Protein GI194334736 
COG category[R] General function prediction only 
COG ID[COG1137] ABC-type (unclassified) transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACTCCA CACTTAGCTG TCACAAGTTA AAAAAGATCT ACAATAAACG GGAAGTCGTC 
AAAAACTCCA CAATAGAGGT CAGACAGGGC GAAATCGTCG GCCTTCTGGG GCCTAACGGG
GCCGGTAAAA CCACGACGTT CTATATGATC GTAGGACTGG TTCGACCCGA TGGCGGAGAC
GTTTTTCTCG ACAGTACGGA AATCACGCCC CTGCCCATGT TCAGAAGAGC AAGGCTCGGT
ATAGGCTATT TACCACAGGA AGCCTCGGTC TTCAGGAAAA TGACGGTTGA AGATAACATC
AGAAGCGTCC TGGAATTTTC TCCGCTCACC AGGGATCAGC AGCATGAACG GACAGAACAG
ATGCTTGAAG ATTTCAACAT AACGCACATC CGCAAAAACA TGGGCTATTC GCTTTCCGGC
GGAGAACGAA GACGCACTGA AATTGCCCGC GCGCTTGCGC TGAACCCCAA ATTCATTCTT
CTCGATGAAC CCTTTGCCGG TGTCGATCCG ATTGCTGTCG AGGATATTCA GGAGATTGTC
CGAAACCTCG TCAAGCGCAA CATCGGAATT CTCATTACCG ATCACAATGT CCATGAAACA
CTCTCGATCA CCAGTCATGC CTACCTGATG TTCGATGGTG CGATCTTCAT GCAGGGCACA
CCGGCTGAAA TAGCCGACGA TCCTGAAGCA AGAAAGCTCT ATCTGGGAGA AAAGTTCTCA
CTCGACAGAT ACTGA
 
Protein sequence
MNSTLSCHKL KKIYNKREVV KNSTIEVRQG EIVGLLGPNG AGKTTTFYMI VGLVRPDGGD 
VFLDSTEITP LPMFRRARLG IGYLPQEASV FRKMTVEDNI RSVLEFSPLT RDQQHERTEQ
MLEDFNITHI RKNMGYSLSG GERRRTEIAR ALALNPKFIL LDEPFAGVDP IAVEDIQEIV
RNLVKRNIGI LITDHNVHET LSITSHAYLM FDGAIFMQGT PAEIADDPEA RKLYLGEKFS
LDRY