| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Paes_1928 |
|---|
| Symbol | |
|---|
| ID | 6460033 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prosthecochloris aestuarii DSM 271 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011059 |
|---|
| Strand | + |
|---|
| Start bp | 2110931 |
|---|
| End bp | 2111695 |
|---|
| Gene Length | 765 bp |
|---|
| Protein Length | 254 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 642725913 |
|---|
| Product | NADH ubiquinone oxidoreductase 20 kDa subunit |
|---|
| Protein accession | YP_002016587 |
|---|
| Protein GI | 194334727 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1941] Coenzyme F420-reducing hydrogenase, gamma subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 38 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCAACATC TCGGGTTTTC GCACTCGAAG CTGAAAATCG GCTCATTTGA TTTCACCTGC
TGCGAAGGCT GCCAGCTGCA GCTTGCAAAC AGAGAATCAA GCCTCGTGGA ATTTCTGGAT
CTCCTCGATA TCCGCAATTT TCGTGAAATC TCTTCGGAAA GACATGACGA TTACGATATC
GCTCTGGTCG AGGGCAGCAT CAGCCGTGAA GATGAGGTTC AGCGTCTCAA GGCCATACGA
AACCAGGCAA AAGTCTTGAT CGCATACGGC AGCTGCGCCT GTTTCGGAGG AATCAACAGC
CTGAAAAACA GCTTCACCAC AGAACAATGC GTCCGTGACG TCTACGGCGA CAGCCATGTA
GACACCCTTC CCGTTCGCAG AATCAGCGAC GTGGTCAACG TCGATTTCAG CATTCCGGGG
TGCCCGGTTT CAAAAGAAGA GGTTGAGCAT ATCATCGTCA GTATCGCGAC CGGTGCTATG
GTGAGCCTTC CGAAATATCC GGTCTGCGTG GAGTGTAAAC AGCAGCTCAA CACCTGCCTG
TTCGATCTTG GAGAAATCTG TCTCGGCCCC ATCACCAGAG CCGGCTGCAA GGCGGTCTGC
CCTACCGGTA AAACAGCATG TCTCGGCTGC AGAGGACCTG CAGAGGATCT CAATGGCGCA
TCATTCCTCC AGCTGGTTGC CGATCGCGGG CTCAGCATGG ATGAACTGGA TGAAAAGCTC
CGCTTTTATA ACTGTTTCGA GGATCTCAGC AATGGCAAAA GTTGA
|
|---|
| Protein sequence | MQHLGFSHSK LKIGSFDFTC CEGCQLQLAN RESSLVEFLD LLDIRNFREI SSERHDDYDI
ALVEGSISRE DEVQRLKAIR NQAKVLIAYG SCACFGGINS LKNSFTTEQC VRDVYGDSHV
DTLPVRRISD VVNVDFSIPG CPVSKEEVEH IIVSIATGAM VSLPKYPVCV ECKQQLNTCL
FDLGEICLGP ITRAGCKAVC PTGKTACLGC RGPAEDLNGA SFLQLVADRG LSMDELDEKL
RFYNCFEDLS NGKS
|
|---|
| |