Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Paes_1923 |
Symbol | |
ID | 6460040 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prosthecochloris aestuarii DSM 271 |
Kingdom | Bacteria |
Replicon accession | NC_011059 |
Strand | - |
Start bp | 2105735 |
End bp | 2106532 |
Gene Length | 798 bp |
Protein Length | 265 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 642725908 |
Product | tRNA/rRNA methyltransferase (SpoU) |
Protein accession | YP_002016582 |
Protein GI | 194334722 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0566] rRNA methylases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTTCGC AACGTTATCC TTACGCTGCC AAAGGGATGA TCAAGCGCTT TGCCAGACTT CATCAGAAAA AGTATCGGGA GAGAGAGGGC TGTTTTCTTG CCGAGGGTCT GCGGACAGTG AGCGAACTGC TTCGGCAGAT GCCATCCGTA GAGGCTCTTG TCGCCTTGTT TGTTGGTGCC GACCAGCTCG CTCTCATACC CTTTCCGGAG CGCTACCGTG AGAAACTGTT CCTGCTTGAG CAGGAAGAGA TGAGACGCCT TGCCGCAACG ACAACATCAC AGGGTGTTAT TGGGGTTTTT CGTATGGGGT CAGAAGACAG GCTTTCCCGG GCTGATGAAG GCCCCTCTCT CGTTGTTGCG CTCGATGATG TGCAGGATCC CGGTAATGTC GGCACCATTA TCCGCACGGC GGCATGGTTC GGCGCTGCAG CCGTCATTTC GGGACGGGGG ACGGCAGACT GCTATAACCC GAAATCCGTT CGGTCGAGTG CGGGAAGCCT CTACGGTCTG GAGCTTTACA GTGCCGATGA TCTCGGTGTG GAACTCGGCC GTTTACAAGC CCGGGGTTTT CATATCGTGA CTGCATCGTT GCAGGGGACC GATATTCGTG CTTTCAAGGT GTGGCCACCC AGGCTTGTTC TTGTTATAGG AAACGAAGCA AACGGTGTCA GCCTGCCGAT TCAGAAGATT TCGGATAGCA TGGTCATGAT TCCGCACGGC CCTGCCAGTC CTCATGTCGA GTCTCTTAAC GCTGCTGTAT CAGCCGCCAT TCTGATTTCC CGCTTTTCTC TTGGCTGA
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Protein sequence | MTSQRYPYAA KGMIKRFARL HQKKYREREG CFLAEGLRTV SELLRQMPSV EALVALFVGA DQLALIPFPE RYREKLFLLE QEEMRRLAAT TTSQGVIGVF RMGSEDRLSR ADEGPSLVVA LDDVQDPGNV GTIIRTAAWF GAAAVISGRG TADCYNPKSV RSSAGSLYGL ELYSADDLGV ELGRLQARGF HIVTASLQGT DIRAFKVWPP RLVLVIGNEA NGVSLPIQKI SDSMVMIPHG PASPHVESLN AAVSAAILIS RFSLG
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