Gene Paes_1923 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPaes_1923 
Symbol 
ID6460040 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProsthecochloris aestuarii DSM 271 
KingdomBacteria 
Replicon accessionNC_011059 
Strand
Start bp2105735 
End bp2106532 
Gene Length798 bp 
Protein Length265 aa 
Translation table11 
GC content55% 
IMG OID642725908 
ProducttRNA/rRNA methyltransferase (SpoU) 
Protein accessionYP_002016582 
Protein GI194334722 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0566] rRNA methylases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTTCGC AACGTTATCC TTACGCTGCC AAAGGGATGA TCAAGCGCTT TGCCAGACTT 
CATCAGAAAA AGTATCGGGA GAGAGAGGGC TGTTTTCTTG CCGAGGGTCT GCGGACAGTG
AGCGAACTGC TTCGGCAGAT GCCATCCGTA GAGGCTCTTG TCGCCTTGTT TGTTGGTGCC
GACCAGCTCG CTCTCATACC CTTTCCGGAG CGCTACCGTG AGAAACTGTT CCTGCTTGAG
CAGGAAGAGA TGAGACGCCT TGCCGCAACG ACAACATCAC AGGGTGTTAT TGGGGTTTTT
CGTATGGGGT CAGAAGACAG GCTTTCCCGG GCTGATGAAG GCCCCTCTCT CGTTGTTGCG
CTCGATGATG TGCAGGATCC CGGTAATGTC GGCACCATTA TCCGCACGGC GGCATGGTTC
GGCGCTGCAG CCGTCATTTC GGGACGGGGG ACGGCAGACT GCTATAACCC GAAATCCGTT
CGGTCGAGTG CGGGAAGCCT CTACGGTCTG GAGCTTTACA GTGCCGATGA TCTCGGTGTG
GAACTCGGCC GTTTACAAGC CCGGGGTTTT CATATCGTGA CTGCATCGTT GCAGGGGACC
GATATTCGTG CTTTCAAGGT GTGGCCACCC AGGCTTGTTC TTGTTATAGG AAACGAAGCA
AACGGTGTCA GCCTGCCGAT TCAGAAGATT TCGGATAGCA TGGTCATGAT TCCGCACGGC
CCTGCCAGTC CTCATGTCGA GTCTCTTAAC GCTGCTGTAT CAGCCGCCAT TCTGATTTCC
CGCTTTTCTC TTGGCTGA
 
Protein sequence
MTSQRYPYAA KGMIKRFARL HQKKYREREG CFLAEGLRTV SELLRQMPSV EALVALFVGA 
DQLALIPFPE RYREKLFLLE QEEMRRLAAT TTSQGVIGVF RMGSEDRLSR ADEGPSLVVA
LDDVQDPGNV GTIIRTAAWF GAAAVISGRG TADCYNPKSV RSSAGSLYGL ELYSADDLGV
ELGRLQARGF HIVTASLQGT DIRAFKVWPP RLVLVIGNEA NGVSLPIQKI SDSMVMIPHG
PASPHVESLN AAVSAAILIS RFSLG