Gene Paes_1893 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPaes_1893 
Symbol 
ID6460100 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProsthecochloris aestuarii DSM 271 
KingdomBacteria 
Replicon accessionNC_011059 
Strand
Start bp2068109 
End bp2068780 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content53% 
IMG OID642725878 
Productphospholipase/Carboxylesterase 
Protein accessionYP_002016552 
Protein GI194334692 
COG category[R] General function prediction only 
COG ID[COG0400] Predicted esterase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTCAGC GTCAACATTT CGCAACGCTT ACCTGTCTCG ACATGCACTC CGGTGAAAAT 
AATGGCGAAG ACATCATCGT CATGCTGCAC GGATACGGCA GTAACGAAAA AGACCTCATT
CAGCTAACTC CCTACCTTGG CAGTAACCTG CACGCGATAA GTGCGAGAGC TCCCCTCCAG
CTCGATATGG AAATGTATGC CTGGTTTCCC ATCGAGTTTA CGCCTGAAGG CATTACAGTA
GACTACCCAG CAGCCAGAGA GGCCTCGAAT CGTCTCAATG CCTTTCTGCA TGCGATCATC
GATCACTACC AGCCAAAGCA TTCCAGAGTC TGGCTGATGG GCTTCAGTCA GGGCGCGGTC
ATGAGCTACC TGACGGCGCT CTTTGAGCCG TCCATACTCA ATGGAGTCAT CGCTCTGTCC
GGGCAGTTCC CTGAAGCCGA GGCTGGCGCA ATGCCCCAGA GCCCTCTGCT CCGGGATCTG
CCATTTCTGG TAGTTCACGG AGAATACGAC GATGTCCTCC CCGTCATGAA CGGCAGACGA
TCACGGCAAT GGCTTTCAAA GCAGGTCAAC GACCTCTCCT ACATGGAGTA TCCGATGGGA
CACGAAATCA ACAGCCAAGA ACTCAATCTC ATTGGCAGGT GGCTTGATGA GCAGCGCAGC
AAAAAGCAGT AA
 
Protein sequence
MLQRQHFATL TCLDMHSGEN NGEDIIVMLH GYGSNEKDLI QLTPYLGSNL HAISARAPLQ 
LDMEMYAWFP IEFTPEGITV DYPAAREASN RLNAFLHAII DHYQPKHSRV WLMGFSQGAV
MSYLTALFEP SILNGVIALS GQFPEAEAGA MPQSPLLRDL PFLVVHGEYD DVLPVMNGRR
SRQWLSKQVN DLSYMEYPMG HEINSQELNL IGRWLDEQRS KKQ