Gene Paes_1884 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPaes_1884 
Symbol 
ID6460119 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProsthecochloris aestuarii DSM 271 
KingdomBacteria 
Replicon accessionNC_011059 
Strand
Start bp2058319 
End bp2059545 
Gene Length1227 bp 
Protein Length408 aa 
Translation table11 
GC content49% 
IMG OID642725869 
ProductFAD-dependent pyridine nucleotide-disulphide oxidoreductase 
Protein accessionYP_002016543 
Protein GI194334683 
COG category[R] General function prediction only 
COG ID[COG0446] Uncharacterized NAD(FAD)-dependent dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTAAAA AAATTGTTGT TCTCGGGGCG GGTACAGGTG GTACGATTGT TTCGAATAAC 
CTCCGGAGAC ATCTTCCGGA CGAGTGGGAG ATAACGGTTA TCGACAGAGA TGACAAGCAT
GTCTACCAGC CGGGACTGCT ATTTGTGCCA TTCGGGCTCC AGAAGGTCGG TTCCCTGACG
AGATCGAGGA AACGCTACAT TTTGAAGGGC GTCAATTTTG TGATCGATGA GATAATCAAT
ATCGACACAG CCAAACGTGA GGTGACAACC AGAAACCATA CGTTTTCATA TGATTTTCTC
GTTATCAGTA CCGGCTGCAG GGTTCTTCCT GAAGAAACCG ATGGCATGGA GGAGGCATGG
GGAAAAGACG CGTTTACGTT TTACTATCCG GACGCGGCAG AAACGCTTCG TCAGAAACTC
AACGAATTTG ACGGAGGAAA ACTGGTGATG GATATAGCCG ACGTGCCGTT CAAATGCCCG
GTAGCCCCGA TTGAATTTGT GTTTCTTGCT GACTGGTTTC TCAAAAAGAA GGGTATACGA
AAAAAGAGTG AGATTGAACT GGTGACACCG CTGCAGGGGG CTTTTACGAA GCCTAAAGCT
TCGGCGGTTC TCAGCGAGGC AGCCAGGGAG AAGAATGTCG GTATGAGAAC GGGTTTCCAG
CTCAACACGG TTAACGGTAA GGAAAAATAT ATTGAATCAG TTCAGGGAGA GAAGATCTCC
TTTGATACGC TGGTCGTTGT CCCTACGACC TTTGGCGACA GTGTCATAAG CGATTCGGGT
ATTGATGACG GGATCGGCTA TGTTCCGACG CACCACAATA CCCTGCAGGC GCTCAAACAT
GAGCGAGTCT ATGTTGTCGG GGATGCTACC AATGTTCCAA CGTCGAAAGC CGGATCTGTA
GCTCACTATG AGGCTGATGT CGTTGTTTTC AATATTATGG CTGAGATTCA CGGCGTCAAG
CCGGAAGAGA TTTTCGATGG TCACTCGACC TGCTTTATCG TTTACTCGAA AGGCACCTCT
TCACTTATTG ATTTCAACTA TAAGATCGAG CCTCTTCCCG GCAAATTCCC TGCGCCTCAT
CTCGGACCTT TCTCGCTGCT CAGGGAGACG AAGATGAACT GGAAAGGGAA GCTTGGCTTT
GAATGGTTGT ACTGGAATGT TTTGTTGGCA GGCCGCCATC TCGGCGCGCC CCCGACCCTT
GTGATGGCAG GTAAAGAGGT TGGGTAA
 
Protein sequence
MAKKIVVLGA GTGGTIVSNN LRRHLPDEWE ITVIDRDDKH VYQPGLLFVP FGLQKVGSLT 
RSRKRYILKG VNFVIDEIIN IDTAKREVTT RNHTFSYDFL VISTGCRVLP EETDGMEEAW
GKDAFTFYYP DAAETLRQKL NEFDGGKLVM DIADVPFKCP VAPIEFVFLA DWFLKKKGIR
KKSEIELVTP LQGAFTKPKA SAVLSEAARE KNVGMRTGFQ LNTVNGKEKY IESVQGEKIS
FDTLVVVPTT FGDSVISDSG IDDGIGYVPT HHNTLQALKH ERVYVVGDAT NVPTSKAGSV
AHYEADVVVF NIMAEIHGVK PEEIFDGHST CFIVYSKGTS SLIDFNYKIE PLPGKFPAPH
LGPFSLLRET KMNWKGKLGF EWLYWNVLLA GRHLGAPPTL VMAGKEVG