Gene Paes_1882 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPaes_1882 
Symbol 
ID6460120 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProsthecochloris aestuarii DSM 271 
KingdomBacteria 
Replicon accessionNC_011059 
Strand
Start bp2055589 
End bp2057031 
Gene Length1443 bp 
Protein Length480 aa 
Translation table11 
GC content54% 
IMG OID642725867 
ProductO-succinylbenzoate-CoA ligase 
Protein accessionYP_002016541 
Protein GI194334681 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II 
TIGRFAM ID[TIGR01923] O-succinylbenzoate-CoA ligase 


Plasmid Coverage information

Num covering plasmid clones44 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACCTTA TAAAAAGAGC TGCACGACGC TTTAAAGACA ACCCGGCCAT CCTGACAGGC 
AACACAACCA TCTCGTTCAG CGAGCTTGAC GCGACAACAG CACGAATAGC GGAAGCAATG
CGGAAAAGAG GCATCGAAAA AGGCCAGATC ATCGCTCTCG TCATGCCGAA CAGTTCTGCA
ATGATTCTGC TGCTGCTTGC CCTGATGAGA AGAGGTTCGA TTGCAGCCCC TATGAACTAC
CGATTTCCTG CATCCCGTCT TCAACGAGCG CTCCAGCAAC TCAAGCCGGT GGCCGTCATA
GGCCCTGAAT CGCTCACCGG AGACCTGCAT GTCCCTCCTC TCAAACTCAC ACCGGAAGAA
CTGACAGAGA CCTCTGAAAC ACCACCATCC CGGCACATCG ACCCTGGAAC CGCACAACAG
CTCAACAACG AAACAACGTT GTCACTCGAC ACGCTTTCAA CGATCATTCA CACCTCGTCC
AGCTCCGGCA CACCCAAAGC GGCCCTGCAC ACCCTTCGTA ATCACTGCTT CAGCGCACTC
GGCTCAAACG AAAACATTGC GTTCGCACCA GGCGACTGCT GGCTCCTCTC TCTGCCACTT
TTCCACATAG GAGGCTATGC CATCCTCATC CGATCACTGG TCGGGGGAGG AGCCATCGCA
GTCCCTGCTG AAGAGATGAA TATCGACAAA GCACTCTCTG CCTATCCGAT AACGCATCTC
TCTCTTGTAC CAACCCAGCT CTATCGTCTT GTCAAGCACC CCGACAGCTG CAAAACGCTC
AAAAGCCTTA AAGCAGTACT GCTCGGCGGC AGTGCCGTCG AACCTGCACT CCTGCAGGAG
GCATCACAAT CCGAACTCCC GGTCTACCTC AGTTACGGCT CAACGGAAAT GAGCTCCCAG
ATCACCACAA CTCCCGGCCC CACAACAACG ATCACTGCAG GCAGACAGCT CCGATTCCGT
GAACTTTCTC TCGGAAAAGG GAATGAAATC CTCGTCAAAG GCCCATGTCT TTTCCAGGGA
TACCTCTCTG GCAATGCGCC CATGCTCAAG ACGGATAAAG AGGGCTGGTT CCATACGGGA
GATACAGGAG CATTCTCTCC TGAAGGGGAA CTGCACATCA CCGGCAGAAC GGATAATATG
TTCATTTCAG GAGGCGAAAA CATCCACCCG GAAGAGATCG AGCGCACCCT TTGCGCTATC
CAGGGGATCA GACGAGCCAT CGTGGTACCG TTACGAGATC AGGAGTTCGG GTTCCGGCCA
AAAGCGTTTA TCGAAGCCAC GTCCGAAGCC CCCGACAACA GGATAATCAT CGAAACAGTC
TATCGCCGGA CAGGTCGCCT GAAAACACCG GTAGCCATCA CAAGAATCAC CTCATGGCAT
CTCTTGCCCG GAACTGAAAA AATTGACCGC GGCTACTACA AACGACTCGC AATAACCTGC
TGA
 
Protein sequence
MDLIKRAARR FKDNPAILTG NTTISFSELD ATTARIAEAM RKRGIEKGQI IALVMPNSSA 
MILLLLALMR RGSIAAPMNY RFPASRLQRA LQQLKPVAVI GPESLTGDLH VPPLKLTPEE
LTETSETPPS RHIDPGTAQQ LNNETTLSLD TLSTIIHTSS SSGTPKAALH TLRNHCFSAL
GSNENIAFAP GDCWLLSLPL FHIGGYAILI RSLVGGGAIA VPAEEMNIDK ALSAYPITHL
SLVPTQLYRL VKHPDSCKTL KSLKAVLLGG SAVEPALLQE ASQSELPVYL SYGSTEMSSQ
ITTTPGPTTT ITAGRQLRFR ELSLGKGNEI LVKGPCLFQG YLSGNAPMLK TDKEGWFHTG
DTGAFSPEGE LHITGRTDNM FISGGENIHP EEIERTLCAI QGIRRAIVVP LRDQEFGFRP
KAFIEATSEA PDNRIIIETV YRRTGRLKTP VAITRITSWH LLPGTEKIDR GYYKRLAITC