| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Paes_1876 |
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| Symbol | |
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| ID | 6460130 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prosthecochloris aestuarii DSM 271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011059 |
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| Strand | + |
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| Start bp | 2048782 |
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| End bp | 2049387 |
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| Gene Length | 606 bp |
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| Protein Length | 201 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 642725861 |
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| Product | Tetratricopeptide TPR_2 repeat protein |
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| Protein accession | YP_002016535 |
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| Protein GI | 194334675 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG5010] Flp pilus assembly protein TadD, contains TPR repeats |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 42 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTATCAGA TCTCTCTCCA ACGTTTCAAG CCTTCTTTGC GGGCCATGAC GGCAATCATG
CTGCTTGTTG TCGGCGCAAC GCACCTGTCC GGATGTGACC AGTCAGCCAA ACAGATCAAG
GATCTTCAAC AGGAAGTCTG GCAAAATCCT GACAGTCCTG AGGCCTATAT CAAACTCGGT
ACCGCTCATG CCCGGCAGGA ACAGTATGAT GCCGCTATCG ATGCCTATGA AAAGGCGCTT
TCACTCGACC CTGACAGTGG CGAAAGAGTT TTTCCTGTCC TCGGAGCTAT CGCATTCAAC
AGAGAGGAAT ATGAAAAAGC ACTGGACTAC TTCCACAAAA GTCTTGCATT TTCACCTGAA
GACTCTCTGC GATTCTATGA TATGGGAAAT GTCTACCTGA AACTTGAGCA GAATGAAAAT
GCGATTGAAG CGTATCGCAA GGCCATCGAG TTCAGCGTCT CATTCGAAGA AGCATACTAC
AATCTTGCTA TAAGCTATAT CAGAAACGGC CAGAAAAAAG AAGCAGAGAA GATCTATTCG
TGGCTTCAGG AGAGAAACAA TTACCTTTCC GTCTCCCTCG AAGGGCACCT TAACCCTGAC
AAATAA
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| Protein sequence | MYQISLQRFK PSLRAMTAIM LLVVGATHLS GCDQSAKQIK DLQQEVWQNP DSPEAYIKLG
TAHARQEQYD AAIDAYEKAL SLDPDSGERV FPVLGAIAFN REEYEKALDY FHKSLAFSPE
DSLRFYDMGN VYLKLEQNEN AIEAYRKAIE FSVSFEEAYY NLAISYIRNG QKKEAEKIYS
WLQERNNYLS VSLEGHLNPD K
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