Gene Paes_1870 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPaes_1870 
Symbol 
ID6460139 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProsthecochloris aestuarii DSM 271 
KingdomBacteria 
Replicon accessionNC_011059 
Strand
Start bp2042235 
End bp2043581 
Gene Length1347 bp 
Protein Length448 aa 
Translation table11 
GC content51% 
IMG OID642725854 
Productcitrate synthase I 
Protein accessionYP_002016529 
Protein GI194334669 
COG category[C] Energy production and conversion 
COG ID[COG0372] Citrate synthase 
TIGRFAM ID[TIGR01798] citrate synthase I (hexameric type) 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.859731 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTACACC CAAACAACGA TCACTCACTG ACCATCACCG ATAACCGAAC AGGAAAAAGC 
TATACGATTC CTATAGAGTG CGGTACGGTA AGAACGATGG ATCTTCGGCA GATCAAGGTT
AAGGAGGATG ATTTTGGCCT TCTTGGTTAC GATCCCGGTT TTCTCAATAC AGCCTCCTGC
AAGAGTCAGG TAACCTATAT CGATGGAGAA AAGGGTATTC TCCGCTACAG GGGGTATCCT
ATCGAGCAGC TTGCTGAAAA AAGTTCATTT CTGGAAACAG CCTACCTTCT CATCAAAGGG
CAGCTGCCGG ATCATGACCG GCTTGCCGCC TGGGGAAAAA ATATCCAGAG CCATACGATG
GTCCACACCA ATCTCGCCAA GTTTATGGAC GGGTTTCGCT ACGATGGCCA TCCAATGGGT
ATTCTTGTCG GGACTGTCGG TGCCCTTTCG ACCTTCTATC CGGGAGCGAA AAACATTTTC
GACAAGGAGT CCAGAAAGCT TCAGGTTCGA AGGCTGATCG GGAAGATGCC AACCCTTGCG
GCGATGAGCT TTCGTCACAG TATGGGTTTC CCTTATGTGC TTCCGGATAA TGATCTGAGC
TACACTGGAA ATTTTCTTTC CATGATGTTC AAGATGACCG AGTTGAAGTA TACGCCAAAC
CCGGTTCTGG AAAAGGCCCT GGACGTTCTT TTTATTCTTC ATGCCGATCA TGAGCAGAAC
TGTTCGACAA GCGCCGTGCG TTCGGTTGGG AGTTCACAGG TCGATCCCTA TTCCGCCCTG
GCGGCAGGGT GCGCCGCATT GTACGGTCCT TTGCATGGCG GAGCCAACGA AGCGGTGATT
CGAATGCTTG AACGCATAGG CTCTGTCGAC CGTGTTCCTG AATTCATCAG ATCCGTTAAA
TCCGGAGAGG GCCGCCTTAT GGGATTCGGC CACAGGGTGT ACAAGAATTA CGATCCAAGG
GCCCGCATTA TCAAGAAGAT TGCCTTTGAG GTTTTTGATG TTACAGGAAC CAACGATCTG
CTCGATATCG CTCTTGAGCT TGAACGGATC GCACTTGAGG ACGATTACTT CGTCAGCCGC
AAGCTCTATC CGAACGTTGA TTTCTATTCC GGTCTTATCT ACCAGGCTAT GGGATTTCCG
CTTGACATGT TTCCTGTTCT TTTTGCCATC GGCAGAACGC CGGGCTGGCT TGCCCAGTGG
ACTGAACATG TCAATGACAG TGAGCAGAAA ATTTCCCGTC CCCGCCAGAT GTATCTTGGC
GAGGAACAGC GCGATTACGT GCTGATTGAC GAGCGTTTAC CGCTTAATCC CGATGAGGAG
CTGATGCCGG GCATGTGCAG GCTCTGA
 
Protein sequence
MVHPNNDHSL TITDNRTGKS YTIPIECGTV RTMDLRQIKV KEDDFGLLGY DPGFLNTASC 
KSQVTYIDGE KGILRYRGYP IEQLAEKSSF LETAYLLIKG QLPDHDRLAA WGKNIQSHTM
VHTNLAKFMD GFRYDGHPMG ILVGTVGALS TFYPGAKNIF DKESRKLQVR RLIGKMPTLA
AMSFRHSMGF PYVLPDNDLS YTGNFLSMMF KMTELKYTPN PVLEKALDVL FILHADHEQN
CSTSAVRSVG SSQVDPYSAL AAGCAALYGP LHGGANEAVI RMLERIGSVD RVPEFIRSVK
SGEGRLMGFG HRVYKNYDPR ARIIKKIAFE VFDVTGTNDL LDIALELERI ALEDDYFVSR
KLYPNVDFYS GLIYQAMGFP LDMFPVLFAI GRTPGWLAQW TEHVNDSEQK ISRPRQMYLG
EEQRDYVLID ERLPLNPDEE LMPGMCRL