Gene Paes_1863 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPaes_1863 
Symbol 
ID6460154 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProsthecochloris aestuarii DSM 271 
KingdomBacteria 
Replicon accessionNC_011059 
Strand
Start bp2036987 
End bp2038234 
Gene Length1248 bp 
Protein Length415 aa 
Translation table11 
GC content53% 
IMG OID642725847 
Productchlorophyllide reductase subunit Y 
Protein accessionYP_002016522 
Protein GI194334662 
COG category[C] Energy production and conversion 
COG ID[COG2710] Nitrogenase molybdenum-iron protein, alpha and beta chains 
TIGRFAM ID[TIGR02015] chlorophyllide reductase subunit Y 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGAAAAA ATATATGTGA AAATCTTCAT CCACAGTCCA TGTGTCCCGC TTTCGGGGGA 
TTGAGGGTGT TAACAAGAAT AGATGGCGCG AGAGTCTGTC TCGTTGCCGA TCAGGGGTGC
CTCTATGGGT TGACTTTTGT CTCTCATTTT TATGCTGCCC GAAAATCGAT TTCAGCCCCT
GAGCTGATGA ATGTGCAGAT ATCCGGGGGG AGCATGATTG ACGATGTCAG GGCAGCGATC
GAGGAGATCG CATCCGACCC GTCAGTGACC TTTATTGCCG TTGTCACTAC CTGCGTGGCT
GAAACTGCAG GTCTTGCCGA GGAGCTTCTT CCTCGTCATG CCGGTCATGC CGCTGTTCAG
CTTATACGGC TGCCGGCATT TCAGATCAAG ACGCATCCCG AGGCGAAGGA TGTCGCTGTT
GCAGCGCTGC TTGAGCGTTT TGGAGAGTTT TCAGGTCAGC AGAAAAAGAA GTCCCTGCTT
GTCGTTGGAG AGATATTCCC TGTTGATGCC ATGACTATCG GTTCCGTTCT GCAGCGTATC
GGCGTGGAAT CCGTCATAAC ACTTCCTGCG GGAGATCTTG ATGATTATCG TCAGGCCGGT
CTGGCCGGTG CCTGTGCCGT TCTTCATCCC TTTTACGAAC GAACGGTCTC TCTTCTCGAG
GAAAAGGGCA TGAAGATAGT GTCCGGCAAT CCCATCGGTG CCGGTGCATC GGCTGAGTGG
ATCGGCAGGG TAGGTGAGGC GCTTGATCTC GACCCTGCGC TTGTCAGCCA GGTTGCGGAG
GAGGAAAAGC AGAAAGCAAA AGCGGCTATA GAGCAGTTTT CCGGTCTGTC CGGCAAGGTC
ATTATTGCCG GTTACGAAGG CAATGAGCTT CCAGTCGTGC GTCTCCTGCT CGAAGCCGGT
CTTGATGTGC CGTACGCTTC GACGTCTATA TCCAGGACGG CTCTTGGTGA AGAGGACCAT
CAGCTTTTGA GCATGCTCGG CACTGAAATC CGGTACCGTA AATTTCTTGA GGAGGATATG
GACGCCGTGC TTCGCTACCA GCCGGATCTT GTGATCGGCA CCACGTCCCT TGACAGTTTT
GCCAAAGAGC AGGGCATTGC CGCGGTCTAC TATACCAACA ATATGTCGTC AAGGCCTGTT
TTTTTTGCAG CCGGGGCCGC GACGGTTCTC TCCATGATCG CCGGTTTGCT CGGCCGTAAA
GAGGCGTTCA GGAAGATGAA AGCCTACTTT GACGAAAGTC TATCCTGA
 
Protein sequence
MGKNICENLH PQSMCPAFGG LRVLTRIDGA RVCLVADQGC LYGLTFVSHF YAARKSISAP 
ELMNVQISGG SMIDDVRAAI EEIASDPSVT FIAVVTTCVA ETAGLAEELL PRHAGHAAVQ
LIRLPAFQIK THPEAKDVAV AALLERFGEF SGQQKKKSLL VVGEIFPVDA MTIGSVLQRI
GVESVITLPA GDLDDYRQAG LAGACAVLHP FYERTVSLLE EKGMKIVSGN PIGAGASAEW
IGRVGEALDL DPALVSQVAE EEKQKAKAAI EQFSGLSGKV IIAGYEGNEL PVVRLLLEAG
LDVPYASTSI SRTALGEEDH QLLSMLGTEI RYRKFLEEDM DAVLRYQPDL VIGTTSLDSF
AKEQGIAAVY YTNNMSSRPV FFAAGAATVL SMIAGLLGRK EAFRKMKAYF DESLS