Gene Paes_1860 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPaes_1860 
Symbol 
ID6460165 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProsthecochloris aestuarii DSM 271 
KingdomBacteria 
Replicon accessionNC_011059 
Strand
Start bp2033760 
End bp2035898 
Gene Length2139 bp 
Protein Length712 aa 
Translation table11 
GC content53% 
IMG OID642725844 
ProductATP-dependent DNA helicase RecG 
Protein accessionYP_002016519 
Protein GI194334659 
COG category[K] Transcription
[L] Replication, recombination and repair 
COG ID[COG1200] RecG-like helicase 
TIGRFAM ID[TIGR00643] ATP-dependent DNA helicase RecG
[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTATGT TGAGAATGAA TAGTGACTCA ACTCCTCTGA CCTTTGTCAA AGGAGTTGGC 
CCGGAGAAAG CCAGGGTGCT TGAAGCCGAA GGGCTCGGGA GCGTCCGGGA TCTCTACGAG
TATTTTCCCA GACGTTACCT CGACAGGAGC AGGCTGAAAT CGATAGGTTC TCTTGCCGAG
GGTGAACTTG TGACGGTTGT CGGAACGGTA TCGCGGGCAG AAAAAGAGCG TTCTTCATCC
GGAAAGGCTC TTTTCAGGGT CTGGCTATCG GACGGGACCG GTAATCTTGT GCTGACCTGG
TTCCGGGGGG CGGTCTATTT TTCGAAAATG GTTCGTCCGG GCGACCTTCT GGCAGTGCAT
GGCAAGGTTG GTTTTTTTTG TGGCCATGCC CAGATGCAGC ATCCTGATTT TGACCGTTTA
CAGGACGCTT CGGCAGAAAG CGGAGCCAAA GGGGTGAGCG ATGCAGATCT TTTCCATACA
GGCGGGATTA TCCCGCTCTA TCCGGTAACG GATGCCATGA AAAAAGCGGG GCTGGATTCC
CGGCGTCTGC GTGCGATTAT ACTCCGCGCA ATGGAAAGCC ATCCTGCCTT CATAGACGAA
CATCTTCCGG ACAGCATCAT TGCCTCTCAC GGTTTGCTGG AGATCAATCT GGCATATCGT
CAGATTCATT GTCCTGTTTC CTCCGAAATG CTTGAGCGGG CTGTCCACCG TTTTAAATGG
AATGAGCTCT TTTACGCCCA GCTCTTTTTC GCTCTTCGCT ATCACGCGCA GAAAAAGAAT
AATGCAGCGG TGCGTTTCGA GCGTTCCGGG GACAAAACAG CGCTTTTGTA CTCCCTGCTG
CCATTCAGTA TGACAGATGC TCAGAAACAG GCGGTTCGCG AGATTTATCG AGACCTGAGA
AGCGGCTCCC AGATGAACAG ACTGCTTCAG GGTGATGTGG GGTCGGGTAA AACCCTTGTT
GCCATGTTTT CGATGGCACT TGCAGTCGAT AACGGCCTTC AGGCTGCCAT CATGGCGCCG
ACCGAAATTC TGGCTTTCCA GCACTGGCTC GGTATCCGGA AATATTGCGA ACCGCTCGGC
CTGCGTGTCG GTCTCCTTAC CGGCAGCCAG AAAAAAAAGG AGAGGGACGT CATATTGAGC
GGCCTTGAGG ATGGTTCATA TGATCTCGCT GTCGGAACGC ATGCCATGAT CGAGGAGCGG
GTGCGGTTTA AAAGGCTCGG CCTGATTATT ATCGATGAAC AGCACCGGTT CGGTGTTCTG
CAACGCAAGG CGCTTCAGGA TAAATCCGTG AATCCTCATG TGCTGCTGAT GACGGCGACA
CCCATACCCA GAACGCTCTG TATGGGGGCG TTTGGTGATC TTGACGTGAC GCTGATCGAT
GAGTTGCCGG GGGGCAGAAA AGCGATCGTT ACCCGTCTGT GCCACGAAAA CAGCAAGCCA
CGGGTTTTAG AGCTGATCCG AAAAGAGGTT GCGGCGGGCC GGCAGGCATA TATTGTCTAT
CCGCTTGTCG ATGAATCTGA AAAAATCGAT CTTAAAGCTG CTACGGACAG TTATCTGCAG
TTGCAAAAGG ATCTTTTGCC TGAATTAAGG ATCGGTCTGG TTCACGGCCG GATGAAGCCT
GCCGAAAAAG AGCTCATCAT GGACCGGTTC AGGCAGGGAG ATGTCGATGT GCTTGTCGGG
ACAACGGTTA TAGAGGTGGG GGTTGATGTT CCCAATGCCA CAGTCATGGT CATCGAGCAT
GCTGAGCGTT TTGGTCTTGC ACAGCTGCAT CAGCTCAGGG GGCGTGTCGG CAGGGGGCCT
GAGCAGTCCT ATTGCTATTT ACTCTACTCC CGTCTTGGTG GTGATGCCGC AGAGCGGTTA
CGGGCGATGG AGGCGTCGAC AGATGGGTTC AGGTTGTCGG AGATTGACGC CCGGATCCGT
GGAACGGGCA ATGTTCTGGG AAAGGAGCAG TCCGGTATGG TTTCAGGTTT TTCGATGGCG
GATCTGAACC GTGATTCGGA GATTCTTGAC GTTGCACGAG ATGCGGCGTT TCGTCTTGTC
GATGATGATC CTCAGCTTCG AAATCCTCTG CATCGCGGTA TTCGAAATTA TTATACAACG
CATTATCATG AAAAATTTTC TCTTGCCGAT ATTGGCTGA
 
Protein sequence
MSMLRMNSDS TPLTFVKGVG PEKARVLEAE GLGSVRDLYE YFPRRYLDRS RLKSIGSLAE 
GELVTVVGTV SRAEKERSSS GKALFRVWLS DGTGNLVLTW FRGAVYFSKM VRPGDLLAVH
GKVGFFCGHA QMQHPDFDRL QDASAESGAK GVSDADLFHT GGIIPLYPVT DAMKKAGLDS
RRLRAIILRA MESHPAFIDE HLPDSIIASH GLLEINLAYR QIHCPVSSEM LERAVHRFKW
NELFYAQLFF ALRYHAQKKN NAAVRFERSG DKTALLYSLL PFSMTDAQKQ AVREIYRDLR
SGSQMNRLLQ GDVGSGKTLV AMFSMALAVD NGLQAAIMAP TEILAFQHWL GIRKYCEPLG
LRVGLLTGSQ KKKERDVILS GLEDGSYDLA VGTHAMIEER VRFKRLGLII IDEQHRFGVL
QRKALQDKSV NPHVLLMTAT PIPRTLCMGA FGDLDVTLID ELPGGRKAIV TRLCHENSKP
RVLELIRKEV AAGRQAYIVY PLVDESEKID LKAATDSYLQ LQKDLLPELR IGLVHGRMKP
AEKELIMDRF RQGDVDVLVG TTVIEVGVDV PNATVMVIEH AERFGLAQLH QLRGRVGRGP
EQSYCYLLYS RLGGDAAERL RAMEASTDGF RLSEIDARIR GTGNVLGKEQ SGMVSGFSMA
DLNRDSEILD VARDAAFRLV DDDPQLRNPL HRGIRNYYTT HYHEKFSLAD IG