Gene Paes_1857 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPaes_1857 
Symbol 
ID6460169 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProsthecochloris aestuarii DSM 271 
KingdomBacteria 
Replicon accessionNC_011059 
Strand
Start bp2030019 
End bp2031257 
Gene Length1239 bp 
Protein Length412 aa 
Translation table11 
GC content46% 
IMG OID642725841 
Producthypothetical protein 
Protein accessionYP_002016516 
Protein GI194334656 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCAGT GTCCAGTATC CCATCTCCCG GTAATAGAAA AGGACAGATG GAATGTATCC 
CACCCGAAAG CAGGATATAC AACAATATTC AAAGGAATCG GCACCAACAT CATCTATGCA
GGAGTTCAGG CCGACTCTGA AGGAGTTGTC CTTGATTCTA TAGACAAGAA TATGTTCCAG
CAGGTGATCG AAGAGATGGG TATGAAGGGA ACGCCGGTGT TTACCATCGT CAATCTGGAA
AATGTCAACG GCATTTCGTA TACATACAAA AAAGATTTCG TCAATATCGC CTACAACTGG
GGGCCACAAT TCAGACTTCT GGTCATCTGT AATGCCGACA TATCCGTCCG AAACGTTGTT
GATACGTTTA TAGCTGTCAC TCCCGATTCT CTTCCTATAC GATGCGCTGG CAGTTATGAA
GAGGGAATCA GCATGATTTT TGACTGCATG AACGCACAAA ACGGGACATC AATCGCCAGA
GGAGAAGAAG ATGCCCAGGA CACAACCTAC GACTATAAAA AGGAATTTTT AGCCTCGCTT
GCACGCATGA GCTGGTTCAA ACTCTTCTCC TACCCCATCA GGCTTCCGGA AAAAGATCAT
GAGCTCTATC CCTATATGAA AGCGCTTGCC TGTCTGCAGG AGGATCTTCA GGCAAGGGAT
GATCTGCACA AGCAGCAAAC AAAAAAGCTC AGGCAGGACT ACGATCAGAA AATCCTCGAA
AAAAACATTC TCCTTAACGC ACAACAGGAA CTCAACAATT CGCTCAAACA GCAACTGGAG
AGTGAGAAAA ACACCCTGAC CAACGAGGTT GCGGCTAAAG ACATGGAACT GATTCGAGTT
TCAACGGCAA TTGCCGAAAA AACAATCCGC CTCAAAGAGT TGTGCGCCAG GCTTTCAACG
ATGGATATCG ATGACGAGCT GAAAAAGAAA ATGACGTGCT CCTGCCAAAA GCTTATTGCA
ACAGAAGAGA ACGAAAAACG GTTTGAGAGT TGTCTGGATG AGATAGAATC AAGTTTCCTT
TCAAAACTCC AGCAGAAACA TCCGGACCTC AACCAGCGAG AACTGCGCCT CTGTCTGCTG
ATAAAAAACA ATATTCATAC CCGTGAGATA GCTGCATCAA TCGGCATCAC CCCCAGAGGG
GTGGAAAGTA TCCGCTACAG GCTTCACAAA AAACTGAAGC TCAGCCGACA TGAATCGATC
AAAAACTATC TTGCCCGGGC AGCGACACTC CTGCGATAA
 
Protein sequence
MNQCPVSHLP VIEKDRWNVS HPKAGYTTIF KGIGTNIIYA GVQADSEGVV LDSIDKNMFQ 
QVIEEMGMKG TPVFTIVNLE NVNGISYTYK KDFVNIAYNW GPQFRLLVIC NADISVRNVV
DTFIAVTPDS LPIRCAGSYE EGISMIFDCM NAQNGTSIAR GEEDAQDTTY DYKKEFLASL
ARMSWFKLFS YPIRLPEKDH ELYPYMKALA CLQEDLQARD DLHKQQTKKL RQDYDQKILE
KNILLNAQQE LNNSLKQQLE SEKNTLTNEV AAKDMELIRV STAIAEKTIR LKELCARLST
MDIDDELKKK MTCSCQKLIA TEENEKRFES CLDEIESSFL SKLQQKHPDL NQRELRLCLL
IKNNIHTREI AASIGITPRG VESIRYRLHK KLKLSRHESI KNYLARAATL LR