Gene Paes_1837 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPaes_1837 
Symbol 
ID6460220 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProsthecochloris aestuarii DSM 271 
KingdomBacteria 
Replicon accessionNC_011059 
Strand
Start bp2007521 
End bp2008201 
Gene Length681 bp 
Protein Length226 aa 
Translation table11 
GC content51% 
IMG OID642725821 
ProductATP-dependent Clp protease, proteolytic subunit ClpP 
Protein accessionYP_002016496 
Protein GI194334636 
COG category[O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0740] Protease subunit of ATP-dependent Clp proteases 
TIGRFAM ID[TIGR00493] ATP-dependent Clp protease, proteolytic subunit ClpP 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAAATA TCAATTTCGG CTTTGAGCGG CAGGCACAGA AAATGTATTC CGGCGCTATA 
GAGCAGGGTA TCCAGAACAG TCTTGTCCCG ATGGTTATCG AAACATCCGG CCGCGGTGAA
AGGGCTTTCG ATATCTTTTC CCGTCTTCTC AGGGAACGTA TCATTTTTCT GGGCACTCCC
ATTGACGAGC ATGTGGCAAG TCTTCTCATG GCTCAGCTGA TTTTTCTGGA ATCCGAAGAT
CCTGAGCGCG ATATATATAT TTACATTAAT TCACCGGGGG GCAGTGTTTC GGCCGGACTG
GGTATTTACG ATACCATGCA GTATATCCGT CCCGAAGTCT CTACCGTCTG CGTCGGTATG
GCAGCCAGCA TGGGCGCGTT TCTTCTGGCA AGCGGTGCGA AAGATAAACG AGCGTCGCTT
CCGCACTCCC GCATCATGAT CCATCAGCCA TCCGGCGGTG CTCAGGGCCA GGAGACAGAT
ATTCTTATTC AGGCTCGCGA GATCGAGAAA ATACGCAAGC TCCTTGATGA AATCCTTGCA
CAGCATACCG GTCAGGACGT CCAGAAAATC AGGTCTGATT CCGAACGGGA CCGCTGGATG
AATGCAGAAG AGGCGAAAGC CTATGGCATT ATCGACCAGA TTTTCGACCG CCGTCCAGCC
CTGGATAAAA AGGATGCCTG A
 
Protein sequence
MANINFGFER QAQKMYSGAI EQGIQNSLVP MVIETSGRGE RAFDIFSRLL RERIIFLGTP 
IDEHVASLLM AQLIFLESED PERDIYIYIN SPGGSVSAGL GIYDTMQYIR PEVSTVCVGM
AASMGAFLLA SGAKDKRASL PHSRIMIHQP SGGAQGQETD ILIQAREIEK IRKLLDEILA
QHTGQDVQKI RSDSERDRWM NAEEAKAYGI IDQIFDRRPA LDKKDA