Gene Paes_1830 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPaes_1830 
Symbol 
ID6460236 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProsthecochloris aestuarii DSM 271 
KingdomBacteria 
Replicon accessionNC_011059 
Strand
Start bp1997921 
End bp1998832 
Gene Length912 bp 
Protein Length303 aa 
Translation table11 
GC content48% 
IMG OID642725814 
Productband 7 protein 
Protein accessionYP_002016489 
Protein GI194334629 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0330] Membrane protease subunits, stomatin/prohibitin homologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCTCTC TACTTTTTTT AGGCATCATC CTGCTGTTTA TCGGTTTCAC GACGAAGACC 
CTGAATCCAG GGCTCCTTCG ATTTTCAAGC CTTTTCAAAA TCGGCGGCAT TCTTGCCATC
ATTCTGGCTC TTCTGACAGC AAGCATCAGA ATTATCGAGC CGGGAAAGGT CGGTGTAAAA
GTCCTTTTCG GTGAGGTTAA GGAGAACATT CTTGCAAGCG GATTGAATAT TATCAATCCC
CTGATCAAAG TCGAAATGTT TGACATCACG ACACAGACCT ATACGATGTC GGGGACTGAA
ACAGAGCTCA CCCAGCTCAG CGACGCTCCG ATCCGGGTAC TCAGCGCCGA TGGTCTCGAG
GTCACCATCG ATATGACGGT ACTCTACAGG ATCAACCCGA CCAAAGCCCC TGACATCAGA
AGAGAAATCG GGCCGGGCCT TTCCTATATT GACAAAATCG TCCGACCTAC CGCCCGTACC
CGCATCAGGG ACAATGCTGT TATCTATAAC GCGATCGATC TCTATTCAAC AAAACGCGAG
GAGTTCCAGA CAAAAATCTT TGAAAGCATC GAACTGGACT TCAAAAACAG AGGCCTTATC
CTGGAAAACC TTCTTGTTCG CAACATCTCG CTGCCTTCAT CGGTCAAAGC GGCTATAGAA
GCAAAAATCA ACGCCGAACA GGATGCCCAG AAAATGCAGT TTGTTCTGCA GAAAGAGCGA
CAGGAAGCAG AACGAAAACG CGTAGAAGCA ACGGGTATCT CCGACTATCA GCAGATCCTC
ACACGCTCTC TGACTGACAG ACTGCTTGAA TATGAAAGAA TCAAAGCGCT GCAGAACCTC
GTAAAATCAG AGAATGCAAA GGTGATCATC ATGGGTGATA CGAAAGGCGC CTCGGTCCTT
ATAGGAAAAT AG
 
Protein sequence
MSSLLFLGII LLFIGFTTKT LNPGLLRFSS LFKIGGILAI ILALLTASIR IIEPGKVGVK 
VLFGEVKENI LASGLNIINP LIKVEMFDIT TQTYTMSGTE TELTQLSDAP IRVLSADGLE
VTIDMTVLYR INPTKAPDIR REIGPGLSYI DKIVRPTART RIRDNAVIYN AIDLYSTKRE
EFQTKIFESI ELDFKNRGLI LENLLVRNIS LPSSVKAAIE AKINAEQDAQ KMQFVLQKER
QEAERKRVEA TGISDYQQIL TRSLTDRLLE YERIKALQNL VKSENAKVII MGDTKGASVL
IGK