Gene Paes_1824 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPaes_1824 
Symbol 
ID6460251 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProsthecochloris aestuarii DSM 271 
KingdomBacteria 
Replicon accessionNC_011059 
Strand
Start bp1988275 
End bp1988871 
Gene Length597 bp 
Protein Length198 aa 
Translation table11 
GC content50% 
IMG OID642725808 
ProductLemA family protein 
Protein accessionYP_002016483 
Protein GI194334623 
COG category[S] Function unknown 
COG ID[COG1704] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.0438485 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.915056 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGATATT CTGTTTCCAG ACTTTTTGTT CTGCTTGTGC TGACCGTTAT GTCAGGTATG 
CTGAGCAGCT GCGGCTATAA CGCTATACAG CAGAACGACG AATCGGTCAA CAAGGCGTGG
GGTGATCTCG AATCGCAGCT TCAGCGACGT TCAGACCTTA TTCCCAACCT CGTCGCCACA
GTCAAAGGTG CAGCGGATTT CGAGCAGGAG ACGCTTACAG GTGTTATTGA AGCTCGCGCC
AAGGCCTCTT CTGTGCAACT GACGCCTGAA ATGCTCAGCG ATCCACAGGC AATGCAGCAG
TTTCAGAGCG CTCAGGGAGA ACTGTCGGGC ATGCTTTCCC GGCTTATGGT CGTTGTCGAA
CGCTACCCGG AACTCAAGGC CAACCAGAAT TTCAGAGATC TCCAGAACCA GCTGGAAGGA
ACTGAAAATC GTATCAGCGT AGCCCGTCAG CGATACAATG GTGCTGTTGA GGTTTTCAAC
TATTCGATAC GAATGTTTCC CAATTCAATG ACCAACGGTA TGTTGCTGCA TCTCAAACCA
AAAGAGTATT TCAAAGCCGA TGCCGCGTCG CGAGAGGTTC CTGCGGTTAA TTTCTGA
 
Protein sequence
MRYSVSRLFV LLVLTVMSGM LSSCGYNAIQ QNDESVNKAW GDLESQLQRR SDLIPNLVAT 
VKGAADFEQE TLTGVIEARA KASSVQLTPE MLSDPQAMQQ FQSAQGELSG MLSRLMVVVE
RYPELKANQN FRDLQNQLEG TENRISVARQ RYNGAVEVFN YSIRMFPNSM TNGMLLHLKP
KEYFKADAAS REVPAVNF