Gene Paes_1823 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPaes_1823 
Symbol 
ID6460247 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProsthecochloris aestuarii DSM 271 
KingdomBacteria 
Replicon accessionNC_011059 
Strand
Start bp1987493 
End bp1988245 
Gene Length753 bp 
Protein Length250 aa 
Translation table11 
GC content54% 
IMG OID642725807 
Productprotein of unknown function DUF477 
Protein accessionYP_002016482 
Protein GI194334622 
COG category[R] General function prediction only 
COG ID[COG1512] Beta-propeller domains of methanol dehydrogenase type 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0387884 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.867329 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTTTTA AAGTAATGCA AAGTATCATA CAGCGGCTTC CGGCTTTGTG TGTCGCCATA 
CTGATGCTCC TCATGCTTCC GCTTCCGCTC TCGGCACAGG ACATTGCCAG ACTCACGGGG
CGTGTCAACG ACTACGCCGA TATGATTTCA GGCGATGTCG AAGAGCAGAT CGATGCAAAG
CTTCAGGCTT TGGAAGAGGA AGAATCGACA CAGATTGTCG TGCTGACCAT TCCTTCACTT
GAGGGTGAAG TTCTTGAAGA GTACTCCATG CGTGTTGTGG AGGACTGGAA AGTTGGCCAG
AAAAAACTCG ATAACGGAGC GTTGCTCCTG GTTTCTCGTG ATGACCGCAA GCTCAGGATC
GAAGTGGGTT ATGGCCTTGA AGGGAAGCTC ACCGATCTTC AGTCCGGCCG GATCATTGAC
AACCTTATCG TTCCCCGCTT CGCAAGGGGC GCTATAGATG AAGGTTTTCT TGTCGGTATC
GATGCAATGA TTGCTGCCGT CAAAGGAGAA TATATCGCCG CAGATGCTCC CCCTTCAGAT
GACGGGTCAG GCAGTTCGAT TCTGCCTCTG CTCATCATGC TGCTTTTCAT CATCTACTTT
TACCGTCAGG TGCCTCGCAG CGGCAGGGGT TCAGGACCGA TCGTCTTCGG TGGCGGTCCC
GGCGGCTTTT CCGGTGGCGG CGGCTTCAGC AGCGGTGGTT TCAGCGGTGG CGGCGGGAGT
TTCGGAGGTG GTGGATCATC AGGCAACTGG TAA
 
Protein sequence
MIFKVMQSII QRLPALCVAI LMLLMLPLPL SAQDIARLTG RVNDYADMIS GDVEEQIDAK 
LQALEEEEST QIVVLTIPSL EGEVLEEYSM RVVEDWKVGQ KKLDNGALLL VSRDDRKLRI
EVGYGLEGKL TDLQSGRIID NLIVPRFARG AIDEGFLVGI DAMIAAVKGE YIAADAPPSD
DGSGSSILPL LIMLLFIIYF YRQVPRSGRG SGPIVFGGGP GGFSGGGGFS SGGFSGGGGS
FGGGGSSGNW