Gene Paes_1822 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPaes_1822 
Symbol 
ID6460252 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProsthecochloris aestuarii DSM 271 
KingdomBacteria 
Replicon accessionNC_011059 
Strand
Start bp1986802 
End bp1987440 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content49% 
IMG OID642725806 
Productprotein of unknown function DUF477 
Protein accessionYP_002016481 
Protein GI194334621 
COG category[S] Function unknown 
COG ID[COG3762] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0121907 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.874997 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGATC CTGTATCGAA ATTTCTCAAG CAACATGACC GTGATGCTAT CGGCGAGCGA 
GTCCGGCTGG CTGAAGAACG GACATCGGGA GAGATTGTTG TCATGGTTGT TGCTTCCAGC
CACCACTATC CTTTAGCAAA TATTATCGGA GGGGTTCTGG CTGGCCTTCT TGCCGCAGTC
GTGACGGCCT TGCTTACCGG AAGAGAGCAT ATGTGGGATT TTCTCGGGTT TTTTCTGCTG
TTTTTCATAC TCTTCAATGA ACTTTTCAGG CGGGTCTGGT TCCTGAAAAA GCTGTTCGTT
AGGCCGGGAG ACATGGATGA AGAGGTTGAA GAGACCGCTA TTGCATCGTT TTACAAAAAA
GAGGTTTACA ATACCCGTGA CCACAGTGGT ATTTTGCTCT ATATTTCGCT GTTCGAACAC
CGGGTACGGG TTGTGGCCGA TAAGGGGATC AGTGCCGTTG TCAGTCAGGC GGAATGGGAT
ACCATCGTTC AGCGCATTAT TCAGGCAATA CGAACCGGAA AGCAGGCGGA GGCAATCATG
GAAGCGGTAG ACATGTGCGG AGATATACTC TCAAAGCATT TTCCTTCAAA GCCGGATGAC
ACCAACGAAC TTGACAACTC CGTCATTATC GGTCATTAA
 
Protein sequence
MSDPVSKFLK QHDRDAIGER VRLAEERTSG EIVVMVVASS HHYPLANIIG GVLAGLLAAV 
VTALLTGREH MWDFLGFFLL FFILFNELFR RVWFLKKLFV RPGDMDEEVE ETAIASFYKK
EVYNTRDHSG ILLYISLFEH RVRVVADKGI SAVVSQAEWD TIVQRIIQAI RTGKQAEAIM
EAVDMCGDIL SKHFPSKPDD TNELDNSVII GH