| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Paes_1820 |
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| Symbol | |
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| ID | 6460259 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prosthecochloris aestuarii DSM 271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011059 |
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| Strand | - |
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| Start bp | 1985999 |
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| End bp | 1986523 |
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| Gene Length | 525 bp |
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| Protein Length | 174 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 642725804 |
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| Product | Tetratricopeptide TPR_2 repeat protein |
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| Protein accession | YP_002016479 |
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| Protein GI | 194334619 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3063] Tfp pilus assembly protein PilF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.0341047 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.900404 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGTTGT CCAGGTTCAT ACTCCCGTTA TTGCTGTGTC TGTTAACAGC CGGTCTTTCG
GCCTGCGGTC CGGATGCCAG CGAGCTCAAT ACAAGCGGTC TTGAAAAACT CAAGCAGAAA
GATCTTGATG GTGCCTTTGA GGACTTCAGT AAATCTATCG AAAAAGATCC TTCGTTTCCC
GAAGCATATC TGAACCGGGG TTTTGTCTAC GGAAATCGTG GTGAACTGCA GGACGCGCTT
GCGGATTTCA ATAAAGCCAT CGAACTGGAT TCAAATTATA TCGAGGCTTA TTTCAATCGT
GGTTTTATTT ACGGGTATTT TGAAGAGTAC AAAAAATCCG ATGCCGATTT CAGCAAGGTC
ATCGAAATGA ATCCCGGTGA TTCAGAGGCC TTTATCAACC GGGCGCTTAT CCGTTCACGG
ATGGGGGATA GCGAGGGGGA AATTGACGAT CTCAAACAGG CAGCTCTTCT GGGTGACCCG
GGGGCGCAGC ACTGGCTGAA AGAACACAAT GTCTCCTGGG AGTGA
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| Protein sequence | MKLSRFILPL LLCLLTAGLS ACGPDASELN TSGLEKLKQK DLDGAFEDFS KSIEKDPSFP
EAYLNRGFVY GNRGELQDAL ADFNKAIELD SNYIEAYFNR GFIYGYFEEY KKSDADFSKV
IEMNPGDSEA FINRALIRSR MGDSEGEIDD LKQAALLGDP GAQHWLKEHN VSWE
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