Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Paes_1809 |
Symbol | tsf |
ID | 6460278 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prosthecochloris aestuarii DSM 271 |
Kingdom | Bacteria |
Replicon accession | NC_011059 |
Strand | - |
Start bp | 1975195 |
End bp | 1976061 |
Gene Length | 867 bp |
Protein Length | 288 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 642725793 |
Product | elongation factor Ts |
Protein accession | YP_002016468 |
Protein GI | 194334608 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0264] Translation elongation factor Ts |
TIGRFAM ID | [TIGR00116] translation elongation factor Ts |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.864602 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTCAGA TATCTGCAAA AGATGTAAAA GATTTACGCG ATAAAACAGG CGTCGGTATG ATGGACTGCA AGAAAGCCCT GGAGGAAACC GGGGGCGATA TGCAGAAGGC CATTGAATAC CTTCGCAAAA AAGGTGCTGC GCTGGCAGCA AAGCGTGCCG GGCGCGAAGC AAGTGAAGGT ATTATTGCTA TCAGGATCAG CGACGACAAC ACCTCCGGCG TCATCATAGA ACTCAATTGC GAGACGGACT TTGTTGCTCG CGGCGACGAT TTTACCGGTT TCGCTGCTGC TATTGCCGAT CTGGCTCTTG AGAACGGTAT TGCTTCAGCC GAAGCGATGA TGTCGCTCAA GCTTGGCGAA GCCTATGGTA ACGAGAGTGT CGAAGATTCG ATCAAGACAA TGACAGGCCG GCTTGGCGAG AAAATTGATC TCAAGCGTCT CTCTCTCCTG CAGACCTCGA CTGGTATTAT TGCCAGCTAC ATCCATCCCG GATCACAGCT CGGCGCCATT GTCGAACTTG CTACCGATAA ACCGGCGGAG TCAGCAGAAC TGGCTCGCGA TATCGCTATG CAGGTTGCAG CATCCTCCCC AATCGTTGTC GATCGTTCAG TCGTACCGGC TGAGAATATC GAAAAAGAGA AAGAGATTTT CCGTCAGCAG GCACTCAGCC AGGGTAAACC AGAGCAGTTT GTTGAGAAGA TCGTTACAGG AAGGCTTGAA AAGTACTATC AGGAAGTTGT GCTTCTTGAA CAGCCATTTA TCAAAGACAG CAACTCCCGG GTGCAGGGAG TACTTGAAGA ATTCGCTCGT AAGAATGGTG CTGCCGTCTC GGTGACTCGA TTCGTGCGAT ATCAGTTAGG AGCGTAA
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Protein sequence | MSQISAKDVK DLRDKTGVGM MDCKKALEET GGDMQKAIEY LRKKGAALAA KRAGREASEG IIAIRISDDN TSGVIIELNC ETDFVARGDD FTGFAAAIAD LALENGIASA EAMMSLKLGE AYGNESVEDS IKTMTGRLGE KIDLKRLSLL QTSTGIIASY IHPGSQLGAI VELATDKPAE SAELARDIAM QVAASSPIVV DRSVVPAENI EKEKEIFRQQ ALSQGKPEQF VEKIVTGRLE KYYQEVVLLE QPFIKDSNSR VQGVLEEFAR KNGAAVSVTR FVRYQLGA
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