Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Paes_1797 |
Symbol | |
ID | 6458802 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prosthecochloris aestuarii DSM 271 |
Kingdom | Bacteria |
Replicon accession | NC_011059 |
Strand | + |
Start bp | 1963153 |
End bp | 1963962 |
Gene Length | 810 bp |
Protein Length | 269 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 642725781 |
Product | glutamate racemase |
Protein accession | YP_002016456 |
Protein GI | 194334596 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0796] Glutamate racemase |
TIGRFAM ID | [TIGR00067] glutamate racemase |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.850127 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.2795 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTTCTT CTGAGAGTCC CGTAGGTATT TTTGATTCCG GTATTGGAGG GCTTACCGTT GTCAGGGCGA TGCAGGCGAT GCTGCCGGCG GAGCAGATTA TTTATTTCGG TGATACCGCG CGCGTACCCT ACGGCTCCAA ATCCCAGGTT ACCATACGCA AGTACGCGCA TGAGGATACG CTTACCCTCA TGAAGTACCA GCCGAAAATG ATTATTATCG CCTGCAATAC GGTTTCTGCT CTGGGGCTCG ATGTGGTGGA ATCGACAGGA AAAGGAGTCA CCGTCCTGGG AGTACTCAAA GCCGGAGCAG AACTTGCCGT CAGAGAGACC CTCAACGGGC GCATCGGAGT CATCGGGACG CAAGCAACGA TCTGCTCGAA CGCCTACGCA TGCGAAATCA CTGCCCTTGC CCCAGAAATA CAGGTTTTTT CCAAAGCATG CCCGCTCTTT GTCCCCCTTG CAGAGGAAGG CTTCATCAAT CATCCCGCAT CAAAACTGAT TGCCGAAGAG TACCTCGATG AACTGCTCTG CTGCAATATC GATACCCTTG TCCTCGGCTG CACCCACTAC CCTATTCTTA AAACCATGAT CCAGGAGATC ACGGGACCCG ACATCAGGAT CATCGATTCA GCCGAAGCGG TCGCTGCAGG AGCAAGAACT CTCCTTGCCG ACAACGCCCT CCTCAACACC GCAACAACCA CCCGCACCCC GCACCTCCTC GTCAGCGACC TCCCCCAGAA ATTCCAGTCC CTCTACACCC TCTTCCTCTC AGCATCTCAT GTCCCCGATG TAGAACTGGT GGAAGTGTAG
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Protein sequence | MISSESPVGI FDSGIGGLTV VRAMQAMLPA EQIIYFGDTA RVPYGSKSQV TIRKYAHEDT LTLMKYQPKM IIIACNTVSA LGLDVVESTG KGVTVLGVLK AGAELAVRET LNGRIGVIGT QATICSNAYA CEITALAPEI QVFSKACPLF VPLAEEGFIN HPASKLIAEE YLDELLCCNI DTLVLGCTHY PILKTMIQEI TGPDIRIIDS AEAVAAGART LLADNALLNT ATTTRTPHLL VSDLPQKFQS LYTLFLSASH VPDVELVEV
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